Literature DB >> 27814640

DNA polymerases in the mitochondria: A critical review of the evidence.

Rachel Krasich1, William C Copeland2.   

Abstract

Since 1970, the DNA polymerase gamma (PolG) has been known to be the DNA polymerase responsible for replication and repair of mitochondrial DNA, and until recently it was generally accepted that this was the only polymerase present in mitochondria. However, recent data has challenged that opinion, as several polymerases are now proposed to have activity in mitochondria. To date, their exact role of these other DNA polymerases is unclear and the amount of evidence supporting their role in mitochondria varies greatly. Further complicating matters, no universally accepted standards have been set for definitive proof of the mitochondrial localization of a protein. To gain an appreciation of these newly proposed DNA polymerases in the mitochondria, we review the evidence and standards needed to establish the role of a polymerase in the mitochondria. Employing PolG as an example, we established a list of criteria necessary to verify the existence and function of new mitochondrial proteins. We then apply this criteria towards several other putative mitochondrial polymerases. While there is still a lot left to be done in this exciting new direction, it is clear that PolG is not acting alone in mitochondria, opening new doors for potential replication and repair mechanisms.

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Year:  2017        PMID: 27814640      PMCID: PMC5485829          DOI: 10.2741/4510

Source DB:  PubMed          Journal:  Front Biosci (Landmark Ed)        ISSN: 2768-6698


  123 in total

1.  Molecular dissection of the domain architecture and catalytic activities of human PrimPol.

Authors:  Benjamin A Keen; Stanislaw K Jozwiakowski; Laura J Bailey; Julie Bianchi; Aidan J Doherty
Journal:  Nucleic Acids Res       Date:  2014-03-20       Impact factor: 16.971

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Journal:  Nature       Date:  1970-06-27       Impact factor: 49.962

Review 3.  The structure and replication of kinetoplast DNA.

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Journal:  Annu Rev Microbiol       Date:  1995       Impact factor: 15.500

4.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

Review 5.  Mitochondrial diseases in man and mouse.

Authors:  D C Wallace
Journal:  Science       Date:  1999-03-05       Impact factor: 47.728

6.  Trypanosoma brucei has two distinct mitochondrial DNA polymerase beta enzymes.

Authors:  Tina T Saxowsky; Gunjan Choudhary; Michele M Klingbeil; Paul T Englund
Journal:  J Biol Chem       Date:  2003-09-08       Impact factor: 5.157

7.  A mitochondrial protein compendium elucidates complex I disease biology.

Authors:  David J Pagliarini; Sarah E Calvo; Betty Chang; Sunil A Sheth; Scott B Vafai; Shao-En Ong; Geoffrey A Walford; Canny Sugiana; Avihu Boneh; William K Chen; David E Hill; Marc Vidal; James G Evans; David R Thorburn; Steven A Carr; Vamsi K Mootha
Journal:  Cell       Date:  2008-07-11       Impact factor: 41.582

8.  Removal of oxidative DNA damage via FEN1-dependent long-patch base excision repair in human cell mitochondria.

Authors:  Pingfang Liu; Limin Qian; Jung-Suk Sung; Nadja C de Souza-Pinto; Li Zheng; Daniel F Bogenhagen; Vilhelm A Bohr; David M Wilson; Binghui Shen; Bruce Demple
Journal:  Mol Cell Biol       Date:  2008-06-09       Impact factor: 4.272

Review 9.  PrimPol-A new polymerase on the block.

Authors:  Sean G Rudd; Julie Bianchi; Aidan J Doherty
Journal:  Mol Cell Oncol       Date:  2014-10-29

10.  Low-fidelity DNA synthesis by human DNA polymerase theta.

Authors:  Mercedes E Arana; Mineaki Seki; Richard D Wood; Igor B Rogozin; Thomas A Kunkel
Journal:  Nucleic Acids Res       Date:  2008-05-24       Impact factor: 16.971

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  30 in total

Review 1.  POLB: A new role of DNA polymerase beta in mitochondrial base excision repair.

Authors:  Brett A Kaufman; Bennett Van Houten
Journal:  DNA Repair (Amst)       Date:  2017-11-06

Review 2.  Structure and function relationships in mammalian DNA polymerases.

Authors:  Nicole M Hoitsma; Amy M Whitaker; Matthew A Schaich; Mallory R Smith; Max S Fairlamb; Bret D Freudenthal
Journal:  Cell Mol Life Sci       Date:  2019-11-13       Impact factor: 9.261

Review 3.  Mitochondrial DNA Mutagenesis: Feature of and Biomarker for Environmental Exposures and Aging.

Authors:  Tess C Leuthner; Joel N Meyer
Journal:  Curr Environ Health Rep       Date:  2021-11-11

4.  DNA polymerase β: A missing link of the base excision repair machinery in mammalian mitochondria.

Authors:  Rajendra Prasad; Melike Çağlayan; Da-Peng Dai; Cristina A Nadalutti; Ming-Lang Zhao; Natalie R Gassman; Agnes K Janoshazi; Donna F Stefanick; Julie K Horton; Rachel Krasich; Matthew J Longley; William C Copeland; Jack D Griffith; Samuel H Wilson
Journal:  DNA Repair (Amst)       Date:  2017-10-28

Review 5.  Eukaryotic Base Excision Repair: New Approaches Shine Light on Mechanism.

Authors:  William A Beard; Julie K Horton; Rajendra Prasad; Samuel H Wilson
Journal:  Annu Rev Biochem       Date:  2019-06-20       Impact factor: 23.643

Review 6.  Uncovering the important role of mitochondrial dynamics in oogenesis: impact on fertility and metabolic disorder transmission.

Authors:  Marcos Roberto Chiaratti
Journal:  Biophys Rev       Date:  2021-11-23

Review 7.  Family A and B DNA Polymerases in Cancer: Opportunities for Therapeutic Interventions.

Authors:  Vinit Shanbhag; Shrikesh Sachdev; Jacqueline A Flores; Mukund J Modak; Kamalendra Singh
Journal:  Biology (Basel)       Date:  2018-01-02

Review 8.  Mitochondrial function in development and disease.

Authors:  Marlies P Rossmann; Sonia M Dubois; Suneet Agarwal; Leonard I Zon
Journal:  Dis Model Mech       Date:  2021-06-11       Impact factor: 5.758

Review 9.  Off-Target Effects of Drugs that Disrupt Human Mitochondrial DNA Maintenance.

Authors:  Matthew J Young
Journal:  Front Mol Biosci       Date:  2017-11-22

10.  The presence of rNTPs decreases the speed of mitochondrial DNA replication.

Authors:  Josefin M E Forslund; Annika Pfeiffer; Gorazd Stojkovič; Paulina H Wanrooij; Sjoerd Wanrooij
Journal:  PLoS Genet       Date:  2018-03-30       Impact factor: 5.917

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