Literature DB >> 27803249

Adeno-Associated Virus-Mediated Delivery of CRISPR-Cas Systems for Genome Engineering in Mammalian Cells.

Thomas Gaj1, David V Schaffer1,2,3,4.   

Abstract

The CRISPR-Cas9 system has emerged as a highly versatile platform for introducing targeted genome modifications into mammalian cells and model organisms. However, fully capitalizing on the therapeutic potential for this system requires its safe and efficient delivery into relevant cell types. Adeno-associated virus (AAV) vectors are a clinically promising class of engineered gene-delivery vehicles capable of safely infecting a broad range of dividing and nondividing cell types, while also serving as a highly effective donor template for homology-directed repair. Together, CRISPR-Cas9 and AAV technologies have the potential to accelerate both basic research and clinical applications of genome engineering. Here, we present a step-by-step protocol for AAV-mediated delivery of CRISPR-Cas systems into mammalian cells. Procedures are given for the preparation of high-titer virus capable of achieving a diverse range of genetic modifications, including gene knockout and integration.
© 2016 Cold Spring Harbor Laboratory Press.

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Year:  2016        PMID: 27803249      PMCID: PMC6850213          DOI: 10.1101/pdb.prot086868

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  22 in total

1.  A rapid and general assay for monitoring endogenous gene modification.

Authors:  Dmitry Y Guschin; Adam J Waite; George E Katibah; Jeffrey C Miller; Michael C Holmes; Edward J Rebar
Journal:  Methods Mol Biol       Date:  2010

2.  An evolved adeno-associated viral variant enhances gene delivery and gene targeting in neural stem cells.

Authors:  Jae-Hyung Jang; James T Koerber; Jung-Suk Kim; Prashanth Asuri; Tandis Vazin; Melissa Bartel; Albert Keung; Inchan Kwon; Kook In Park; David V Schaffer
Journal:  Mol Ther       Date:  2011-01-11       Impact factor: 11.454

Review 3.  Engineering adeno-associated viruses for clinical gene therapy.

Authors:  Melissa A Kotterman; David V Schaffer
Journal:  Nat Rev Genet       Date:  2014-05-20       Impact factor: 53.242

4.  Directed evolution of adeno-associated virus for enhanced gene delivery and gene targeting in human pluripotent stem cells.

Authors:  Prashanth Asuri; Melissa A Bartel; Tandis Vazin; Jae-Hyung Jang; Tiffany B Wong; David V Schaffer
Journal:  Mol Ther       Date:  2011-11-22       Impact factor: 11.454

5.  Increasing the efficiency of homology-directed repair for CRISPR-Cas9-induced precise gene editing in mammalian cells.

Authors:  Van Trung Chu; Timm Weber; Benedikt Wefers; Wolfgang Wurst; Sandrine Sander; Klaus Rajewsky; Ralf Kühn
Journal:  Nat Biotechnol       Date:  2015-03-24       Impact factor: 54.908

6.  Small molecules enhance CRISPR genome editing in pluripotent stem cells.

Authors:  Chen Yu; Yanxia Liu; Tianhua Ma; Kai Liu; Shaohua Xu; Yu Zhang; Honglei Liu; Marie La Russa; Min Xie; Sheng Ding; Lei S Qi
Journal:  Cell Stem Cell       Date:  2015-02-05       Impact factor: 24.633

7.  In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9.

Authors:  Lukasz Swiech; Matthias Heidenreich; Abhishek Banerjee; Naomi Habib; Yinqing Li; John Trombetta; Mriganka Sur; Feng Zhang
Journal:  Nat Biotechnol       Date:  2014-10-19       Impact factor: 54.908

8.  Efficient genome engineering in human pluripotent stem cells using Cas9 from Neisseria meningitidis.

Authors:  Zhonggang Hou; Yan Zhang; Nicholas E Propson; Sara E Howden; Li-Fang Chu; Erik J Sontheimer; James A Thomson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-12       Impact factor: 11.205

9.  In vivo genome editing using Staphylococcus aureus Cas9.

Authors:  F Ann Ran; Le Cong; Winston X Yan; David A Scott; Jonathan S Gootenberg; Andrea J Kriz; Bernd Zetsche; Ophir Shalem; Xuebing Wu; Kira S Makarova; Eugene V Koonin; Phillip A Sharp; Feng Zhang
Journal:  Nature       Date:  2015-04-01       Impact factor: 49.962

10.  COSMID: A Web-based Tool for Identifying and Validating CRISPR/Cas Off-target Sites.

Authors:  Thomas J Cradick; Peng Qiu; Ciaran M Lee; Eli J Fine; Gang Bao
Journal:  Mol Ther Nucleic Acids       Date:  2014-12-02       Impact factor: 10.183

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  8 in total

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Authors:  Allen Khakshooy; Nicole Balenton; Francesco Chiappelli
Journal:  Bioinformation       Date:  2017-10-31

2.  Treatment of a Mouse Model of ALS by In Vivo Base Editing.

Authors:  Colin K W Lim; Michael Gapinske; Alexandra K Brooks; Wendy S Woods; Jackson E Powell; M Alejandra Zeballos C; Jackson Winter; Pablo Perez-Pinera; Thomas Gaj
Journal:  Mol Ther       Date:  2020-01-14       Impact factor: 11.454

3.  Overview of CRISPR-Cas9 Biology.

Authors:  Hannah K Ratner; Timothy R Sampson; David S Weiss
Journal:  Cold Spring Harb Protoc       Date:  2016-12-01

4.  CRISPR-READI: Efficient Generation of Knockin Mice by CRISPR RNP Electroporation and AAV Donor Infection.

Authors:  Sean Chen; Sabrina Sun; Dewi Moonen; Clancy Lee; Angus Yiu-Fai Lee; David V Schaffer; Lin He
Journal:  Cell Rep       Date:  2019-06-25       Impact factor: 9.423

5.  In vivo genome editing improves motor function and extends survival in a mouse model of ALS.

Authors:  Thomas Gaj; David S Ojala; Freja K Ekman; Leah C Byrne; Prajit Limsirichai; David V Schaffer
Journal:  Sci Adv       Date:  2017-12-20       Impact factor: 14.136

6.  Targeted gene knock-in by homology-directed genome editing using Cas9 ribonucleoprotein and AAV donor delivery.

Authors:  Thomas Gaj; Brett T Staahl; Gonçalo M C Rodrigues; Prajit Limsirichai; Freja K Ekman; Jennifer A Doudna; David V Schaffer
Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

7.  CRISPR-Cas9-Mediated Genome Editing Increases Lifespan and Improves Motor Deficits in a Huntington's Disease Mouse Model.

Authors:  Freja K Ekman; David S Ojala; Maroof M Adil; Paola A Lopez; David V Schaffer; Thomas Gaj
Journal:  Mol Ther Nucleic Acids       Date:  2019-07-26

8.  Targeted gene silencing in the nervous system with CRISPR-Cas13.

Authors:  Jackson E Powell; Colin K W Lim; Ramya Krishnan; Tristan X McCallister; Christian Saporito-Magriña; Maria A Zeballos; Garrett D McPheron; Thomas Gaj
Journal:  Sci Adv       Date:  2022-01-19       Impact factor: 14.136

  8 in total

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