Literature DB >> 27798610

Fluorescent indicators for simultaneous reporting of all four cell cycle phases.

Bryce T Bajar1,2,3, Amy J Lam1,2, Ryan K Badiee4, Young-Hee Oh1,2,5, Jun Chu1,2, Xin X Zhou1,2,5, Namdoo Kim1,2,5, Benjamin B Kim1,2,5, Mingyu Chung6, Arielle L Yablonovitch7, Barney F Cruz8, Kanokwan Kulalert9, Jacqueline J Tao1, Tobias Meyer6, Xiao-Dong Su3, Michael Z Lin1,2,5.   

Abstract

A robust method for simultaneous visualization of all four cell cycle phases in living cells is highly desirable. We developed an intensiometric reporter of the transition from S to G2 phase and engineered a far-red fluorescent protein, mMaroon1, to visualize chromatin condensation in mitosis. We combined these new reporters with the previously described Fucci system to create Fucci4, a set of four orthogonal fluorescent indicators that together resolve all cell cycle phases.

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Year:  2016        PMID: 27798610      PMCID: PMC5548384          DOI: 10.1038/nmeth.4045

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  29 in total

1.  Cell cycle heterogeneity in the small intestinal crypt and maintenance of genome integrity.

Authors:  Steven C Pruitt; Amy Freeland; Angela Kudla
Journal:  Stem Cells       Date:  2010-07       Impact factor: 6.277

2.  NIH Image to ImageJ: 25 years of image analysis.

Authors:  Caroline A Schneider; Wayne S Rasband; Kevin W Eliceiri
Journal:  Nat Methods       Date:  2012-07       Impact factor: 28.547

3.  Quantitative analysis of cell cycle phase durations and PC12 differentiation using fluorescent biosensors.

Authors:  Angela T Hahn; Joshua T Jones; Tobias Meyer
Journal:  Cell Cycle       Date:  2009-04-02       Impact factor: 4.534

4.  In toto imaging of embryogenesis with confocal time-lapse microscopy.

Authors:  Sean G Megason
Journal:  Methods Mol Biol       Date:  2009

5.  Visualizing spatiotemporal dynamics of multicellular cell-cycle progression.

Authors:  Asako Sakaue-Sawano; Hiroshi Kurokawa; Toshifumi Morimura; Aki Hanyu; Hiroshi Hama; Hatsuki Osawa; Saori Kashiwagi; Kiyoko Fukami; Takaki Miyata; Hiroyuki Miyoshi; Takeshi Imamura; Masaharu Ogawa; Hisao Masai; Atsushi Miyawaki
Journal:  Cell       Date:  2008-02-08       Impact factor: 41.582

6.  A novel cell-cycle-indicator, mVenus-p27K-, identifies quiescent cells and visualizes G0-G1 transition.

Authors:  Toshihiko Oki; Koutarou Nishimura; Jiro Kitaura; Katsuhiro Togami; Akie Maehara; Kumi Izawa; Asako Sakaue-Sawano; Atsushi Niida; Satoru Miyano; Hiroyuki Aburatani; Hiroshi Kiyonari; Atsushi Miyawaki; Toshio Kitamura
Journal:  Sci Rep       Date:  2014-02-06       Impact factor: 4.379

7.  Characterization of Fluorescent Proteins for Three- and Four-Color Live-Cell Imaging in S. cerevisiae.

Authors:  Ryo Higuchi-Sanabria; Enrique J Garcia; Delia Tomoiaga; Emilia L Munteanu; Paul Feinstein; Liza A Pon
Journal:  PLoS One       Date:  2016-01-04       Impact factor: 3.240

8.  Quantitative assessment of fluorescent proteins.

Authors:  Paula J Cranfill; Brittney R Sell; Michelle A Baird; John R Allen; Zeno Lavagnino; H Martijn de Gruiter; Gert-Jan Kremers; Michael W Davidson; Alessandro Ustione; David W Piston
Journal:  Nat Methods       Date:  2016-05-30       Impact factor: 28.547

9.  Improving FRET dynamic range with bright green and red fluorescent proteins.

Authors:  Amy J Lam; François St-Pierre; Yiyang Gong; Jesse D Marshall; Paula J Cranfill; Michelle A Baird; Michael R McKeown; Jörg Wiedenmann; Michael W Davidson; Mark J Schnitzer; Roger Y Tsien; Michael Z Lin
Journal:  Nat Methods       Date:  2012-09-09       Impact factor: 28.547

10.  A loss-of-function and H2B-Venus transcriptional reporter allele for Gata6 in mice.

Authors:  Laina Freyer; Christian Schröter; Néstor Saiz; Nadine Schrode; Sonja Nowotschin; Alfonso Martinez-Arias; Anna-Katerina Hadjantonakis
Journal:  BMC Dev Biol       Date:  2015-10-24       Impact factor: 1.978

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  59 in total

1.  Illumination of cell cycle progression by multi-fluorescent sensing system.

Authors:  Shuo Liu; Jun Li; Teng Wang; Jiawen Xu; Zhipei Liu; Haobin Wang; Gong-Hong Wei; Alessandro Ianni; Thomas Braun; Shijing Yue
Journal:  Cell Cycle       Date:  2019-05-26       Impact factor: 4.534

2.  Accurate delineation of cell cycle phase transitions in living cells with PIP-FUCCI.

Authors:  Gavin D Grant; Katarzyna M Kedziora; Juanita C Limas; Jeanette Gowen Cook; Jeremy E Purvis
Journal:  Cell Cycle       Date:  2018       Impact factor: 4.534

Review 3.  Visualizing ubiquitination in mammalian cells.

Authors:  Sjoerd Jl van Wijk; Simone Fulda; Ivan Dikic; Mike Heilemann
Journal:  EMBO Rep       Date:  2019-01-21       Impact factor: 8.807

4.  Hematopoietic PBX-interacting protein is a substrate and an inhibitor of the APC/C-Cdc20 complex and regulates mitosis by stabilizing cyclin B1.

Authors:  Saratchandra Singh Khumukcham; Venkata Subramanyam Kumar Samanthapudi; Vasudevarao Penugurti; Anita Kumari; P S Kesavan; Loka Reddy Velatooru; Siva Reddy Kotla; Aprotim Mazumder; Bramanandam Manavathi
Journal:  J Biol Chem       Date:  2019-05-17       Impact factor: 5.157

5.  Fluorescent indicators for continuous and lineage-specific reporting of cell-cycle phases in human pluripotent stem cells.

Authors:  Yun Chang; Peter B Hellwarth; Lauren N Randolph; Yufei Sun; Yuxian Xing; Wuqiang Zhu; Xiaojun Lance Lian; Xiaoping Bao
Journal:  Biotechnol Bioeng       Date:  2020-04-22       Impact factor: 4.530

6.  Practical parameter identifiability for spatio-temporal models of cell invasion.

Authors:  Matthew J Simpson; Ruth E Baker; Sean T Vittadello; Oliver J Maclaren
Journal:  J R Soc Interface       Date:  2020-03-04       Impact factor: 4.118

7.  Mathematical Models for Cell Migration with Real-Time Cell Cycle Dynamics.

Authors:  Sean T Vittadello; Scott W McCue; Gency Gunasingh; Nikolas K Haass; Matthew J Simpson
Journal:  Biophys J       Date:  2018-03-13       Impact factor: 4.033

8.  A guide to choosing fluorescent protein combinations for flow cytometric analysis based on spectral overlap.

Authors:  Benjamin Kleeman; Andre Olsson; Tess Newkold; Matt Kofron; Monica DeLay; David Hildeman; H Leighton Grimes
Journal:  Cytometry A       Date:  2018-03-13       Impact factor: 4.355

Review 9.  On the Molecular Mechanisms Regulating Animal Cell Size Homeostasis.

Authors:  Evgeny Zatulovskiy; Jan M Skotheim
Journal:  Trends Genet       Date:  2020-02-20       Impact factor: 11.639

10.  Cell-to-cell variability and robustness in S-phase duration from genome replication kinetics.

Authors:  Qing Zhang; Federico Bassetti; Marco Gherardi; Marco Cosentino Lagomarsino
Journal:  Nucleic Acids Res       Date:  2017-08-21       Impact factor: 16.971

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