Literature DB >> 27796791

Automatic segmentation of airway tree based on local intensity filter and machine learning technique in 3D chest CT volume.

Qier Meng1, Takayuki Kitasaka2, Yukitaka Nimura3, Masahiro Oda4, Junji Ueno5, Kensaku Mori4,3.   

Abstract

PURPOSE: Airway segmentation plays an important role in analyzing chest computed tomography (CT) volumes for computerized lung cancer detection, emphysema diagnosis and pre- and intra-operative bronchoscope navigation. However, obtaining a complete 3D airway tree structure from a CT volume is quite a challenging task. Several researchers have proposed automated airway segmentation algorithms basically based on region growing and machine learning techniques. However, these methods fail to detect the peripheral bronchial branches, which results in a large amount of leakage. This paper presents a novel approach for more accurate extraction of the complex airway tree.
METHODS: This proposed segmentation method is composed of three steps. First, Hessian analysis is utilized to enhance the tube-like structure in CT volumes; then, an adaptive multiscale cavity enhancement filter is employed to detect the cavity-like structure with different radii. In the second step, support vector machine learning will be utilized to remove the false positive (FP) regions from the result obtained in the previous step. Finally, the graph-cut algorithm is used to refine the candidate voxels to form an integrated airway tree.
RESULTS: A test dataset including 50 standard-dose chest CT volumes was used for evaluating our proposed method. The average extraction rate was about 79.1 % with the significantly decreased FP rate.
CONCLUSION: A new method of airway segmentation based on local intensity structure and machine learning technique was developed. The method was shown to be feasible for airway segmentation in a computer-aided diagnosis system for a lung and bronchoscope guidance system.

Entities:  

Keywords:  Adaptive multiscale cavity enhancement filter; Graph-cut; Hessian matrix analysis; Support vector machine

Mesh:

Year:  2016        PMID: 27796791     DOI: 10.1007/s11548-016-1492-2

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  14 in total

1.  Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images.

Authors:  Y Sato; S Nakajima; N Shiraga; H Atsumi; S Yoshida; T Koller; G Gerig; R Kikinis
Journal:  Med Image Anal       Date:  1998-06       Impact factor: 8.545

2.  Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images.

Authors:  S Hu; E A Hoffman; J M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2001-06       Impact factor: 10.048

3.  Automated detection of pulmonary nodules in helical CT images based on an improved template-matching technique.

Authors:  Y Lee; T Hara; H Fujita; S Itoh; T Ishigaki
Journal:  IEEE Trans Med Imaging       Date:  2001-07       Impact factor: 10.048

4.  Three-dimensional human airway segmentation methods for clinical virtual bronchoscopy.

Authors:  Atilla P Kiraly; William E Higgins; Geoffrey McLennan; Eric A Hoffman; Joseph M Reinhardt
Journal:  Acad Radiol       Date:  2002-10       Impact factor: 3.173

5.  Segmentation and analysis of the human airway tree from three-dimensional X-ray CT images.

Authors:  Deniz Aykac; Eric A Hoffman; Geoffrey McLennan; Joseph M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2003-08       Impact factor: 10.048

6.  Intrathoracic airway trees: segmentation and airway morphology analysis from low-dose CT scans.

Authors:  Juerg Tschirren; Eric A Hoffman; Geoffrey McLennan; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

7.  Pulmonary CT image registration and warping for tracking tissue deformation during the respiratory cycle through 3D consistent image registration.

Authors:  Baojun Li; Gary E Christensen; Eric A Hoffman; Geoffrey McLennan; Joseph M Reinhardt
Journal:  Med Phys       Date:  2008-12       Impact factor: 4.071

8.  Selective enhancement filters for nodules, vessels, and airway walls in two- and three-dimensional CT scans.

Authors:  Qiang Li; Shusuke Sone; Kunio Doi
Journal:  Med Phys       Date:  2003-08       Impact factor: 4.071

Review 9.  A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes.

Authors:  David Lesage; Elsa D Angelini; Isabelle Bloch; Gareth Funka-Lea
Journal:  Med Image Anal       Date:  2009-08-12       Impact factor: 8.545

10.  Automatic segmentation of pulmonary blood vessels and nodules based on local intensity structure analysis and surface propagation in 3D chest CT images.

Authors:  Bin Chen; Takayuki Kitasaka; Hirotoshi Honma; Hirotsugu Takabatake; Masaki Mori; Hiroshi Natori; Kensaku Mori
Journal:  Int J Comput Assist Radiol Surg       Date:  2011-07-08       Impact factor: 2.924

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  7 in total

1.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

Review 2.  Computer-aided Assessment of Catheters and Tubes on Radiographs: How Good Is Artificial Intelligence for Assessment?

Authors:  Xin Yi; Scott J Adams; Robert D E Henderson; Paul Babyn
Journal:  Radiol Artif Intell       Date:  2020-01-29

3.  Hybrid Airway Segmentation Using Multi-Scale Tubular Structure Filters and Texture Analysis on 3D Chest CT Scans.

Authors:  Minho Lee; June-Goo Lee; Namkug Kim; Joon Beom Seo; Sang Min Lee
Journal:  J Digit Imaging       Date:  2019-10       Impact factor: 4.056

4.  Peripheral bronchial identification on chest CT using unsupervised machine learning.

Authors:  Daniel A Moses; Laughlin Dawes; Claude Sammut; Tatjana Zrimec
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-06-13       Impact factor: 2.924

5.  Small airway segmentation in thoracic computed tomography scans: a machine learning approach.

Authors:  Z Bian; J-P Charbonnier; J Liu; D Zhao; D A Lynch; B van Ginneken
Journal:  Phys Med Biol       Date:  2018-08-06       Impact factor: 3.609

6.  A CT-Based Automated Algorithm for Airway Segmentation Using Freeze-and-Grow Propagation and Deep Learning.

Authors:  Syed Ahmed Nadeem; Eric A Hoffman; Jessica C Sieren; Alejandro P Comellas; Surya P Bhatt; Igor Z Barjaktarevic; Fereidoun Abtin; Punam K Saha
Journal:  IEEE Trans Med Imaging       Date:  2020-12-29       Impact factor: 11.037

Review 7.  Assessing pulmonary hypertension in COPD. Is there a role for computed tomography?

Authors:  Florence Coste; Ilyes Benlala; François Laurent; Patrick Berger; Gaël Dournes; Pierre-Olivier Girodet
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2019-09-04
  7 in total

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