Literature DB >> 29995646

Small airway segmentation in thoracic computed tomography scans: a machine learning approach.

Z Bian1, J-P Charbonnier, J Liu, D Zhao, D A Lynch, B van Ginneken.   

Abstract

Small airway obstruction is a main cause for chronic obstructive pulmonary disease (COPD). We propose a novel method based on machine learning to extract the airway system from a thoracic computed tomography (CT) scan. The emphasis of the proposed method is on including the smallest airways that are still visible on CT. We used an optimized sampling procedure to extract airway and non-airway voxel samples from a large set of scans for which a semi-automatically constructed reference standard was available. We created a set of features which represent tubular and texture properties that are characteristic for small airway voxels. A random forest classifier was used to determine for each voxel if it belongs to the airway class. Our method was validated on a set of 20 clinical thoracic CT scans from the COPDGene study. Experiments show that our method is effective in extracting the full airway system and in detecting a large number of small airways that were missed by the semi-automatically constructed reference standard.

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Year:  2018        PMID: 29995646      PMCID: PMC6105345          DOI: 10.1088/1361-6560/aad2a1

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  24 in total

1.  Three-dimensional human airway segmentation methods for clinical virtual bronchoscopy.

Authors:  Atilla P Kiraly; William E Higgins; Geoffrey McLennan; Eric A Hoffman; Joseph M Reinhardt
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2.  Random forest based lung nodule classification aided by clustering.

Authors:  S L A Lee; A Z Kouzani; E J Hu
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3.  Automatic Pulmonary Artery-Vein Separation and Classification in Computed Tomography Using Tree Partitioning and Peripheral Vessel Matching.

Authors:  Jean-Paul Charbonnier; Monique Brink; Francesco Ciompi; Ernst T Scholten; Cornelia M Schaefer-Prokop; Eva M van Rikxoort
Journal:  IEEE Trans Med Imaging       Date:  2015-11-12       Impact factor: 10.048

Review 4.  CT based computerized identification and analysis of human airways: a review.

Authors:  Jiantao Pu; Suicheng Gu; Shusen Liu; Shaocheng Zhu; David Wilson; Jill M Siegfried; David Gur
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

Review 5.  Automated segmentation of pulmonary structures in thoracic computed tomography scans: a review.

Authors:  Eva M van Rikxoort; Bram van Ginneken
Journal:  Phys Med Biol       Date:  2013-09-07       Impact factor: 3.609

6.  Automatic segmentation of the pulmonary lobes from chest CT scans based on fissures, vessels, and bronchi.

Authors:  Bianca Lassen; Eva M van Rikxoort; Michael Schmidt; Sjoerd Kerkstra; Bram van Ginneken; Jan-Martin Kuhnigk
Journal:  IEEE Trans Med Imaging       Date:  2012-09-20       Impact factor: 10.048

7.  Genetic epidemiology of COPD (COPDGene) study design.

Authors:  Elizabeth A Regan; John E Hokanson; James R Murphy; Barry Make; David A Lynch; Terri H Beaty; Douglas Curran-Everett; Edwin K Silverman; James D Crapo
Journal:  COPD       Date:  2010-02       Impact factor: 2.409

8.  Measurement of three-dimensional lung tree structures by using computed tomography.

Authors:  S A Wood; E A Zerhouni; J D Hoford; E A Hoffman; W Mitzner
Journal:  J Appl Physiol (1985)       Date:  1995-11

9.  Small-airway obstruction and emphysema in chronic obstructive pulmonary disease.

Authors:  John E McDonough; Ren Yuan; Masaru Suzuki; Nazgol Seyednejad; W Mark Elliott; Pablo G Sanchez; Alexander C Wright; Warren B Gefter; Leslie Litzky; Harvey O Coxson; Peter D Paré; Don D Sin; Richard A Pierce; Jason C Woods; Annette M McWilliams; John R Mayo; Stephen C Lam; Joel D Cooper; James C Hogg
Journal:  N Engl J Med       Date:  2011-10-27       Impact factor: 91.245

Review 10.  Global, regional, and national incidence, prevalence, and years lived with disability for 301 acute and chronic diseases and injuries in 188 countries, 1990-2013: a systematic analysis for the Global Burden of Disease Study 2013.

Authors: 
Journal:  Lancet       Date:  2015-06-07       Impact factor: 202.731

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  2 in total

1.  Generative-based airway and vessel morphology quantification on chest CT images.

Authors:  Pietro Nardelli; James C Ross; Raúl San José Estépar
Journal:  Med Image Anal       Date:  2020-03-28       Impact factor: 8.545

2.  Creating a training set for artificial intelligence from initial segmentations of airways.

Authors:  Ivan Dudurych; Antonio Garcia-Uceda; Zaigham Saghir; Harm A W M Tiddens; Rozemarijn Vliegenthart; Marleen de Bruijne
Journal:  Eur Radiol Exp       Date:  2021-11-29
  2 in total

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