Literature DB >> 27793291

Interferometric Scattering Microscopy for the Study of Molecular Motors.

J Andrecka1, Y Takagi2, K J Mickolajczyk3, L G Lippert4, J R Sellers2, W O Hancock3, Y E Goldman4, P Kukura5.   

Abstract

Our understanding of molecular motor function has been greatly improved by the development of imaging modalities, which enable real-time observation of their motion at the single-molecule level. Here, we describe the use of a new method, interferometric scattering microscopy, for the investigation of motor protein dynamics by attaching and tracking the motion of metallic nanoparticle labels as small as 20nm diameter. Using myosin-5, kinesin-1, and dynein as examples, we describe the basic assays, labeling strategies, and principles of data analysis. Our approach is relevant not only for motor protein dynamics but also provides a general tool for single-particle tracking with high spatiotemporal precision, which overcomes the limitations of single-molecule fluorescence methods.
© 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Dynein; High speed; Interferometric scattering microscopy; Kinesin; Molecular motors; Myosin; Single molecule; Single-particle tracking

Mesh:

Substances:

Year:  2016        PMID: 27793291      PMCID: PMC5098560          DOI: 10.1016/bs.mie.2016.08.016

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  64 in total

1.  Differential labeling of myosin V heads with quantum dots allows direct visualization of hand-over-hand processivity.

Authors:  David M Warshaw; Guy G Kennedy; Steven S Work; Elena B Krementsova; Samantha Beck; Kathleen M Trybus
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

2.  Bead movement by single kinesin molecules studied with optical tweezers.

Authors:  S M Block; L S Goldstein; B J Schnapp
Journal:  Nature       Date:  1990-11-22       Impact factor: 49.962

3.  Kinesin movement on glutaraldehyde-fixed microtubules.

Authors:  D Turner; C Chang; K Fang; P Cuomo; D Murphy
Journal:  Anal Biochem       Date:  1996-11-01       Impact factor: 3.365

4.  Kinesin-1 motors can circumvent permanent roadblocks by side-shifting to neighboring protofilaments.

Authors:  René Schneider; Till Korten; Wilhelm J Walter; Stefan Diez
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

5.  Direct observation of kinesin stepping by optical trapping interferometry.

Authors:  K Svoboda; C F Schmidt; B J Schnapp; S M Block
Journal:  Nature       Date:  1993-10-21       Impact factor: 49.962

6.  Single-molecule gold-nanoparticle tracking.

Authors:  Alexander R Dunn; James A Spudich
Journal:  Cold Spring Harb Protoc       Date:  2011-12-01

Review 7.  Walking with myosin V.

Authors:  James R Sellers; Claudia Veigel
Journal:  Curr Opin Cell Biol       Date:  2005-12-27       Impact factor: 8.382

8.  Efficient illumination for microsecond tracking microscopy.

Authors:  David Dulin; Stephane Barland; Xavier Hachair; Francesco Pedaci
Journal:  PLoS One       Date:  2014-09-24       Impact factor: 3.240

9.  Structural dynamics of myosin 5 during processive motion revealed by interferometric scattering microscopy.

Authors:  Joanna Andrecka; Jaime Ortega Arroyo; Yasuharu Takagi; Gabrielle de Wit; Adam Fineberg; Lachlan MacKinnon; Gavin Young; James R Sellers; Philipp Kukura
Journal:  Elife       Date:  2015-03-06       Impact factor: 8.140

10.  Label-free, all-optical detection, imaging, and tracking of a single protein.

Authors:  J Ortega Arroyo; J Andrecka; K M Spillane; N Billington; Y Takagi; J R Sellers; P Kukura
Journal:  Nano Lett       Date:  2014-03-21       Impact factor: 11.189

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  7 in total

1.  Direct observation of individual tubulin dimers binding to growing microtubules.

Authors:  Keith J Mickolajczyk; Elisabeth A Geyer; Tae Kim; Luke M Rice; William O Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-25       Impact factor: 11.205

2.  Insights into Kinesin-1 Stepping from Simulations and Tracking of Gold Nanoparticle-Labeled Motors.

Authors:  Keith J Mickolajczyk; Annan S I Cook; Janak P Jevtha; John Fricks; William O Hancock
Journal:  Biophys J       Date:  2019-06-20       Impact factor: 4.033

3.  The mechanochemistry of the kinesin-2 KIF3AC heterodimer is related to strain-dependent kinetic properties of KIF3A and KIF3C.

Authors:  Brandon M Bensel; Michael S Woody; Serapion Pyrpassopoulos; Yale E Goldman; Susan P Gilbert; E Michael Ostap
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-22       Impact factor: 11.205

Review 4.  Scattering-based Light Microscopy: From Metal Nanoparticles to Single Proteins.

Authors:  Lee Priest; Jack S Peters; Philipp Kukura
Journal:  Chem Rev       Date:  2021-09-29       Impact factor: 60.622

Review 5.  Single-molecule fluorescence microscopy review: shedding new light on old problems.

Authors:  Sviatlana Shashkova; Mark C Leake
Journal:  Biosci Rep       Date:  2017-07-21       Impact factor: 3.840

6.  Detailed balance for diffusion in a potential with trapping and forward-backward symmetry of trapping time distributions.

Authors:  Alexander M Berezhkovskii; Dmitrii E Makarov
Journal:  J Chem Phys       Date:  2020-06-14       Impact factor: 3.488

Review 7.  Through the Eyes of Creators: Observing Artificial Molecular Motors.

Authors:  Ivan N Unksov; Chapin S Korosec; Pradheebha Surendiran; Damiano Verardo; Roman Lyttleton; Nancy R Forde; Heiner Linke
Journal:  ACS Nanosci Au       Date:  2022-01-13
  7 in total

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