Literature DB >> 30804205

Direct observation of individual tubulin dimers binding to growing microtubules.

Keith J Mickolajczyk1,2, Elisabeth A Geyer3,4, Tae Kim3,4, Luke M Rice5,4, William O Hancock6,2.   

Abstract

The biochemical basis of microtubule growth has remained elusive for over 30 years despite being fundamental for both cell division and associated chemotherapy strategies. Here, we combine interferometric scattering microscopy with recombinant tubulin to monitor individual tubulins binding to and dissociating from growing microtubule tips. We make direct, single-molecule measurements of tubulin association and dissociation rates. We detect two populations of transient dwell times and determine via binding-interface mutants that they are distinguished by the formation of one interprotofilament bond. Applying a computational model, we find that slow association kinetics with strong interactions along protofilaments best recapitulate our data and, furthermore, predicts plus-end tapering. Overall, we provide the most direct and complete experimental quantification of how microtubules grow to date.

Keywords:  interferometric scattering microscopy; microtubule dynamics; single-molecule kinetics

Mesh:

Substances:

Year:  2019        PMID: 30804205      PMCID: PMC6462098          DOI: 10.1073/pnas.1815823116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  54 in total

1.  Estimates of lateral and longitudinal bond energies within the microtubule lattice.

Authors:  Vincent VanBuren; David J Odde; Lynne Cassimeris
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

2.  Methods in statistical kinetics.

Authors:  Jeffrey R Moffitt; Yann R Chemla; Carlos Bustamante
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

3.  Design, overexpression, and purification of polymerization-blocked yeast αβ-tubulin mutants.

Authors:  Vinu Johnson; Pelin Ayaz; Patrick Huddleston; Luke M Rice
Journal:  Biochemistry       Date:  2011-09-16       Impact factor: 3.162

4.  Monte Carlo study of the GTP cap in a five-start helix model of a microtubule.

Authors:  Y D Chen; T L Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

5.  Structure of growing microtubule ends: two-dimensional sheets close into tubes at variable rates.

Authors:  D Chrétien; S D Fuller; E Karsenti
Journal:  J Cell Biol       Date:  1995-06       Impact factor: 10.539

6.  Microtubule aging probed by microfluidics-assisted tubulin washout.

Authors:  Christian Duellberg; Nicholas Ian Cade; Thomas Surrey
Journal:  Mol Biol Cell       Date:  2016-08-03       Impact factor: 4.138

7.  SKEMPI 2.0: an updated benchmark of changes in protein-protein binding energy, kinetics and thermodynamics upon mutation.

Authors:  Justina Jankauskaite; Brian Jiménez-García; Justas Dapkunas; Juan Fernández-Recio; Iain H Moal
Journal:  Bioinformatics       Date:  2019-02-01       Impact factor: 6.937

8.  A tethered delivery mechanism explains the catalytic action of a microtubule polymerase.

Authors:  Pelin Ayaz; Sarah Munyoki; Elisabeth A Geyer; Felipe-Andrés Piedra; Emily S Vu; Raquel Bromberg; Zbyszek Otwinowski; Nick V Grishin; Chad A Brautigam; Luke M Rice
Journal:  Elife       Date:  2014-08-05       Impact factor: 8.140

9.  Structure and Dynamics of Single-isoform Recombinant Neuronal Human Tubulin.

Authors:  Annapurna Vemu; Joseph Atherton; Jeffrey O Spector; Agnieszka Szyk; Carolyn A Moores; Antonina Roll-Mecak
Journal:  J Biol Chem       Date:  2016-04-25       Impact factor: 5.157

10.  Design principles of a microtubule polymerase.

Authors:  Elisabeth A Geyer; Matthew P Miller; Chad A Brautigam; Sue Biggins; Luke M Rice
Journal:  Elife       Date:  2018-06-13       Impact factor: 8.140

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  26 in total

1.  Watching microtubules grow one tubulin at a time.

Authors:  Nikita Gudimchuk; Antonina Roll-Mecak
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-25       Impact factor: 11.205

2.  Insight into microtubule nucleation from tubulin-capping proteins.

Authors:  Valérie Campanacci; Agathe Urvoas; Soraya Cantos-Fernandes; Magali Aumont-Nicaise; Ana-Andreea Arteni; Christophe Velours; Marie Valerio-Lepiniec; Birgit Dreier; Andreas Plückthun; Antoine Pilon; Christian Poüs; Philippe Minard; Benoît Gigant
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-29       Impact factor: 11.205

3.  Integrated multi-wavelength microscope combining TIRFM and IRM modalities for imaging cellulases and other processive enzymes.

Authors:  Daguan Nong; Zachary K Haviland; Kate Vasquez Kuntz; Ming Tien; Charles T Anderson; William O Hancock
Journal:  Biomed Opt Express       Date:  2021-05-11       Impact factor: 3.732

4.  Fibronectin-targeted dual-acting micelles for combination therapy of metastatic breast cancer.

Authors:  Zhuoran Gong; Min Chen; Qiushi Ren; Xiuli Yue; Zhifei Dai
Journal:  Signal Transduct Target Ther       Date:  2020-02-07

5.  Microtubule Simulations Provide Insight into the Molecular Mechanism Underlying Dynamic Instability.

Authors:  Dudu Tong; Gregory A Voth
Journal:  Biophys J       Date:  2020-05-01       Impact factor: 4.033

6.  Multiscale Computational Modeling of Tubulin-Tubulin Lateral Interaction.

Authors:  Mahya Hemmat; Brian T Castle; Jonathan N Sachs; David J Odde
Journal:  Biophys J       Date:  2019-08-16       Impact factor: 4.033

7.  Structural state recognition facilitates tip tracking of EB1 at growing microtubule ends.

Authors:  Taylor A Reid; Courtney Coombes; Soumya Mukherjee; Rebecca R Goldblum; Kyle White; Sneha Parmar; Mark McClellan; Marija Zanic; Naomi Courtemanche; Melissa K Gardner
Journal:  Elife       Date:  2019-09-03       Impact factor: 8.140

8.  Structural model for differential cap maturation at growing microtubule ends.

Authors:  Juan Estévez-Gallego; Fernando Josa-Prado; Siou Ku; Ruben M Buey; Francisco A Balaguer; Andrea E Prota; Daniel Lucena-Agell; Christina Kamma-Lorger; Toshiki Yagi; Hiroyuki Iwamoto; Laurence Duchesne; Isabel Barasoain; Michel O Steinmetz; Denis Chrétien; Shinji Kamimura; J Fernando Díaz; Maria A Oliva
Journal:  Elife       Date:  2020-03-10       Impact factor: 8.140

9.  The transition state and regulation of γ-TuRC-mediated microtubule nucleation revealed by single molecule microscopy.

Authors:  Akanksha Thawani; Michael J Rale; Nicolas Coudray; Gira Bhabha; Howard A Stone; Joshua W Shaevitz; Sabine Petry
Journal:  Elife       Date:  2020-06-15       Impact factor: 8.140

Review 10.  Scattering-based Light Microscopy: From Metal Nanoparticles to Single Proteins.

Authors:  Lee Priest; Jack S Peters; Philipp Kukura
Journal:  Chem Rev       Date:  2021-09-29       Impact factor: 60.622

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