Literature DB >> 27791185

Control of embryonic stem cell self-renewal and differentiation via coordinated alternative splicing and translation of YY2.

Soroush Tahmasebi1,2, Seyed Mehdi Jafarnejad1,2, Ingrid S Tam1,2, Thomas Gonatopoulos-Pournatzis3, Edna Matta-Camacho1,2, Yoshinori Tsukumo1,2, Akiko Yanagiya1,2, Wencheng Li4, Yaser Atlasi5, Maxime Caron6,7, Ulrich Braunschweig3, Dana Pearl1,2, Arkady Khoutorsky8, Christos G Gkogkas9, Robert Nadon6,7, Guillaume Bourque6,7, Xiang-Jiao Yang1,2,10, Bin Tian4, Hendrik G Stunnenberg5, Yojiro Yamanaka1,6, Benjamin J Blencowe3,11, Vincent Giguère1,2,10, Nahum Sonenberg12,3.   

Abstract

Translational control of gene expression plays a key role during the early phases of embryonic development. Here we describe a transcriptional regulator of mouse embryonic stem cells (mESCs), Yin-yang 2 (YY2), that is controlled by the translation inhibitors, Eukaryotic initiation factor 4E-binding proteins (4E-BPs). YY2 plays a critical role in regulating mESC functions through control of key pluripotency factors, including Octamer-binding protein 4 (Oct4) and Estrogen-related receptor-β (Esrrb). Importantly, overexpression of YY2 directs the differentiation of mESCs into cardiovascular lineages. We show that the splicing regulator Polypyrimidine tract-binding protein 1 (PTBP1) promotes the retention of an intron in the 5'-UTR of Yy2 mRNA that confers sensitivity to 4E-BP-mediated translational suppression. Thus, we conclude that YY2 is a major regulator of mESC self-renewal and lineage commitment and document a multilayer regulatory mechanism that controls its expression.

Entities:  

Keywords:  4E-BPs; PTBP; YY2; embryonic stem cell; mRNA translation

Mesh:

Substances:

Year:  2016        PMID: 27791185      PMCID: PMC5098618          DOI: 10.1073/pnas.1615540113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  71 in total

1.  A hierarchical network controls protein translation during murine embryonic stem cell self-renewal and differentiation.

Authors:  Prabha Sampath; David K Pritchard; Lil Pabon; Hans Reinecke; Stephen M Schwartz; David R Morris; Charles E Murry
Journal:  Cell Stem Cell       Date:  2008-05-08       Impact factor: 24.633

2.  LIN28 Regulates Stem Cell Metabolism and Conversion to Primed Pluripotency.

Authors:  Jin Zhang; Sutheera Ratanasirintrawoot; Sriram Chandrasekaran; Zhaoting Wu; Scott B Ficarro; Chunxiao Yu; Christian A Ross; Davide Cacchiarelli; Qing Xia; Marc Seligson; Gen Shinoda; Wen Xie; Patrick Cahan; Longfei Wang; Shyh-Chang Ng; Supisara Tintara; Cole Trapnell; Tamer Onder; Yuin-Han Loh; Tarjei Mikkelsen; Piotr Sliz; Michael A Teitell; John M Asara; Jarrod A Marto; Hu Li; James J Collins; George Q Daley
Journal:  Cell Stem Cell       Date:  2016-06-16       Impact factor: 24.633

3.  Recruitment of human muscleblind proteins to (CUG)(n) expansions associated with myotonic dystrophy.

Authors:  J W Miller; C R Urbinati; P Teng-Umnuay; M G Stenberg; B J Byrne; C A Thornton; M S Swanson
Journal:  EMBO J       Date:  2000-09-01       Impact factor: 11.598

4.  Assessing gene-level translational control from ribosome profiling.

Authors:  Adam B Olshen; Andrew C Hsieh; Craig R Stumpf; Richard A Olshen; Davide Ruggero; Barry S Taylor
Journal:  Bioinformatics       Date:  2013-09-18       Impact factor: 6.937

5.  Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function.

Authors:  A Pause; G J Belsham; A C Gingras; O Donzé; T A Lin; J C Lawrence; N Sonenberg
Journal:  Nature       Date:  1994-10-27       Impact factor: 49.962

6.  Human genomics. The human transcriptome across tissues and individuals.

Authors:  Marta Melé; Pedro G Ferreira; Ferran Reverter; David S DeLuca; Jean Monlong; Michael Sammeth; Taylor R Young; Jakob M Goldmann; Dmitri D Pervouchine; Timothy J Sullivan; Rory Johnson; Ayellet V Segrè; Sarah Djebali; Anastasia Niarchou; Fred A Wright; Tuuli Lappalainen; Miquel Calvo; Gad Getz; Emmanouil T Dermitzakis; Kristin G Ardlie; Roderic Guigó
Journal:  Science       Date:  2015-05-08       Impact factor: 47.728

7.  Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.

Authors:  Nicholas T Ingolia; Sina Ghaemmaghami; John R S Newman; Jonathan S Weissman
Journal:  Science       Date:  2009-02-12       Impact factor: 47.728

8.  PTBP1 is required for embryonic development before gastrulation.

Authors:  Jakob Suckale; Olivia Wendling; Jimmy Masjkur; Melanie Jäger; Carla Münster; Konstantinos Anastassiadis; A Francis Stewart; Michele Solimena
Journal:  PLoS One       Date:  2011-02-17       Impact factor: 3.240

9.  Genetic exploration of the exit from self-renewal using haploid embryonic stem cells.

Authors:  Martin Leeb; Sabine Dietmann; Maike Paramor; Hitoshi Niwa; Austin Smith
Journal:  Cell Stem Cell       Date:  2014-01-09       Impact factor: 24.633

10.  The translational landscape of the splicing factor SRSF1 and its role in mitosis.

Authors:  Magdalena M Maslon; Sara R Heras; Nicolas Bellora; Eduardo Eyras; Javier F Cáceres
Journal:  Elife       Date:  2014-05-06       Impact factor: 8.140

View more
  24 in total

Review 1.  Translational Control in Cancer.

Authors:  Nathaniel Robichaud; Nahum Sonenberg; Davide Ruggero; Robert J Schneider
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-07-01       Impact factor: 10.005

Review 2.  Translational Control during Developmental Transitions.

Authors:  Felipe Karam Teixeira; Ruth Lehmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

3.  PHF2 histone demethylase prevents DNA damage and genome instability by controlling cell cycle progression of neural progenitors.

Authors:  Stella Pappa; Natalia Padilla; Simona Iacobucci; Marta Vicioso; Elena Álvarez de la Campa; Claudia Navarro; Elia Marcos; Xavier de la Cruz; Marian A Martínez-Balbás
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-05       Impact factor: 11.205

4.  The mTORC1-eIF4F axis controls paused pluripotency.

Authors:  Xueting Xu; Tanveer Ahmed; Lulu Wang; Xintao Cao; Zeyu Zhang; Ming Wang; Yuan Lv; Shahzina Kanwal; Muqddas Tariq; Runxia Lin; Hui Zhang; Yinghua Huang; Hao Peng; Danni Lin; Xue Shi; Didi Geng; Baohua Liu; Xiaofei Zhang; Wen Yi; Yan Qin; Miguel A Esteban; Baoming Qin
Journal:  EMBO Rep       Date:  2021-12-06       Impact factor: 8.807

Review 5.  The Translational Regulation in mTOR Pathway.

Authors:  Miaomiao Yang; Yanming Lu; Weilan Piao; Hua Jin
Journal:  Biomolecules       Date:  2022-06-08

Review 6.  Post-Transcriptional Regulation of Homeostatic, Stressed, and Malignant Stem Cells.

Authors:  Bernadette A Chua; Inge Van Der Werf; Catriona Jamieson; Robert A J Signer
Journal:  Cell Stem Cell       Date:  2020-02-06       Impact factor: 24.633

7.  Position-specific intron retention is mediated by the histone methyltransferase SDG725.

Authors:  Gang Wei; Kunpeng Liu; Ting Shen; Jinlei Shi; Bing Liu; Miao Han; Maolin Peng; Haihui Fu; Yifan Song; Jun Zhu; Aiwu Dong; Ting Ni
Journal:  BMC Biol       Date:  2018-04-30       Impact factor: 7.431

Review 8.  Translational control of stem cell function.

Authors:  James A Saba; Kifayathullah Liakath-Ali; Rachel Green; Fiona M Watt
Journal:  Nat Rev Mol Cell Biol       Date:  2021-07-16       Impact factor: 94.444

9.  YY2 in Mouse Preimplantation Embryos and in Embryonic Stem Cells.

Authors:  Raquel Pérez-Palacios; María Climent; Javier Santiago-Arcos; Sofía Macías-Redondo; Martin Klar; Pedro Muniesa; Jon Schoorlemmer
Journal:  Cells       Date:  2021-05-07       Impact factor: 6.600

10.  Transcription factor Yin Yang 2 is a novel regulator of the p53/p21 axis.

Authors:  Vivi Kasim; Yu-Dan Xie; Hui-Min Wang; Can Huang; Xue-Song Yan; Wei-Qi Nian; Xiao-Dong Zheng; Makoto Miyagishi; Shou-Rong Wu
Journal:  Oncotarget       Date:  2017-05-19
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.