Literature DB >> 27771830

Solid-state NMR chemical shift assignments for AL-09 VL immunoglobulin light chain fibrils.

Dennis W Piehl1, Luis M Blancas-Mejía2, Marina Ramirez-Alvarado3, Chad M Rienstra4,5,6.   

Abstract

Light chain (AL) amyloidosis is a systemic disease characterized by the formation of immunoglobulin light-chain fibrils in critical organs of the body. The light-chain protein AL-09 presents one severe case of cardiac AL amyloidosis, which contains seven mutations in the variable domain (VL) relative to its germline counterpart, κI O18/O8 VL. Three of these mutations are non-conservative-Y87H, N34I, and K42Q-and previous work has shown that they are responsible for significantly reducing the protein's thermodynamic stability, allowing fibril formation to occur with fast kinetics and across a wide-range of pH conditions. Currently, however, there is extremely limited structural information available which explicitly describes the residues that are involved in supporting the misfolded fibril structure. Here, we assign the site-specific 15N and 13C chemical shifts of the rigid residues of AL-09 VL fibrils by solid-state NMR, reporting on the regions of the protein involved in the fibril as well as the extent of secondary structure.

Entities:  

Keywords:  AL amyloidosis; Light chain fibrils; Protein structure; Solid-state NMR

Mesh:

Substances:

Year:  2016        PMID: 27771830      PMCID: PMC5344749          DOI: 10.1007/s12104-016-9718-3

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  12 in total

1.  Comparison of amyloid fibril formation by two closely related immunoglobulin light chain variable domains.

Authors:  Douglas J Martin; Marina Ramirez-Alvarado
Journal:  Amyloid       Date:  2010-09       Impact factor: 7.141

2.  The effects of sodium sulfate, glycosaminoglycans, and Congo red on the structure, stability, and amyloid formation of an immunoglobulin light-chain protein.

Authors:  Richard W McLaughlin; Janelle K De Stigter; Laura A Sikkink; Elizabeth M Baden; Marina Ramirez-Alvarado
Journal:  Protein Sci       Date:  2006-06-02       Impact factor: 6.725

3.  A method for efficient isotopic labeling of recombinant proteins.

Authors:  J Marley; M Lu; C Bracken
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

4.  Altered dimer interface decreases stability in an amyloidogenic protein.

Authors:  Elizabeth M Baden; Barbara A L Owen; Francis C Peterson; Brian F Volkman; Marina Ramirez-Alvarado; James R Thompson
Journal:  J Biol Chem       Date:  2008-04-08       Impact factor: 5.157

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Kinetic control in protein folding for light chain amyloidosis and the differential effects of somatic mutations.

Authors:  Luis M Blancas-Mejía; Alexander Tischer; James R Thompson; Jonathan Tai; Lin Wang; Matthew Auton; Marina Ramirez-Alvarado
Journal:  J Mol Biol       Date:  2013-10-22       Impact factor: 5.469

Review 7.  Amyloid formation in light chain amyloidosis.

Authors:  Marina Ramirez-Alvarado
Journal:  Curr Top Med Chem       Date:  2012       Impact factor: 3.295

8.  Light chain amyloidosis - current findings and future prospects.

Authors:  Elizabeth M Baden; Laura A Sikkink; Marina Ramirez-Alvarado
Journal:  Curr Protein Pept Sci       Date:  2009-10       Impact factor: 3.272

9.  Immunoglobulin light chain variable (V) region genes influence clinical presentation and outcome in light chain-associated amyloidosis (AL).

Authors:  Roshini S Abraham; Susan M Geyer; Tammy L Price-Troska; Cristine Allmer; Robert A Kyle; Morie A Gertz; Rafael Fonseca
Journal:  Blood       Date:  2002-12-19       Impact factor: 22.113

10.  Role of mutations in the cellular internalization of amyloidogenic light chains into cardiomyocytes.

Authors:  Rebecca T Levinson; Oludare O Olatoye; Edward G Randles; Kyle G Howell; Ara Celi DiCostanzo; Marina Ramirez-Alvarado
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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  10 in total

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2.  Macrophage-Mediated Phagocytosis and Dissolution of Amyloid-Like Fibrils in Mice, Monitored by Optical Imaging.

Authors:  Tina Richey; James S Foster; Angela D Williams; Anna B Williams; Alexa Stroh; Sallie Macy; Craig Wooliver; R Eric Heidel; Siva K Varanasi; Elizabeth N Ergen; Dianne J Trent; Stephen A Kania; Stephen J Kennel; Emily B Martin; Jonathan S Wall
Journal:  Am J Pathol       Date:  2019-02-06       Impact factor: 4.307

Review 3.  Insights into protein misfolding and aggregation enabled by solid-state NMR spectroscopy.

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Journal:  Solid State Nucl Magn Reson       Date:  2017-10-04       Impact factor: 2.293

Review 4.  Immunoglobulin light chain amyloid aggregation.

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5.  MAK33 antibody light chain amyloid fibrils are similar to oligomeric precursors.

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Journal:  PLoS One       Date:  2017-07-26       Impact factor: 3.240

6.  Immunoglobulin Light Chains Form an Extensive and Highly Ordered Fibril Involving the N- and C-Termini.

Authors:  Dennis W Piehl; Luis M Blancas-Mejía; Jonathan S Wall; Stephen J Kennel; Marina Ramirez-Alvarado; Chad M Rienstra
Journal:  ACS Omega       Date:  2017-02-27

7.  Cryo-EM reveals structural breaks in a patient-derived amyloid fibril from systemic AL amyloidosis.

Authors:  Lynn Radamaker; Julian Baur; Stefanie Huhn; Christian Haupt; Ute Hegenbart; Stefan Schönland; Akanksha Bansal; Matthias Schmidt; Marcus Fändrich
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8.  Role of mutations and post-translational modifications in systemic AL amyloidosis studied by cryo-EM.

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9.  Sedimentation Yields Long-Term Stable Protein Samples as Shown by Solid-State NMR.

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Journal:  Front Mol Biosci       Date:  2020-02-21

10.  Seeded fibrils of the germline variant of human λ-III immunoglobulin light chain FOR005 have a similar core as patient fibrils with reduced stability.

Authors:  Tejaswini Pradhan; Karthikeyan Annamalai; Riddhiman Sarkar; Stefanie Huhn; Ute Hegenbart; Stefan Schönland; Marcus Fändrich; Bernd Reif
Journal:  J Biol Chem       Date:  2020-10-22       Impact factor: 5.157

  10 in total

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