Literature DB >> 27757696

Establishment of gene transfer and gene silencing methods in a desiccation-tolerant cell line, Pv11.

Yoichiro Sogame1,2, Jun Okada1, Shingo Kikuta3, Yugo Miyata1,4, Richard Cornette1, Oleg Gusev5,6,7, Takahiro Kikawada8,9.   

Abstract

Larvae of the African midge Polypedilum vanderplanki show extreme desiccation tolerance, known as anhydrobiosis. Recently, the cultured cell line Pv11 was derived from this species; Pv11 cells can be preserved in the dry state for over 6 months and retain their proliferation potential. Here, we attempted to expand the use of Pv11 cells as a model to investigate the mechanisms underlying anhydrobiosis in P. vanderplanki. A newly developed vector comprising a constitutive promoter for the PvGapdh gene allowed the expression of exogenous proteins in Pv11 cells. Using this vector, a stable Pv11 cell line expressing green fluorescence protein (GFP) was established and retained desiccation tolerance. Gene silencing with GFP-specific siRNAs significantly suppressed GFP expression to approximately 7.5-34.6% of that in the non-siRNA-transfected GFP stable line. Establishment of these functional assays will enable Pv11 cells to be utilized as an effective tool to investigate the molecular mechanisms underlying anhydrobiosis.

Entities:  

Keywords:  Anhydrobiosis; Desiccation tolerant cells; Gene expression system; RNAi

Mesh:

Substances:

Year:  2016        PMID: 27757696     DOI: 10.1007/s00792-016-0880-4

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  14 in total

1.  Detection of promoter activity by flow cytometric analysis of GFP reporter expression.

Authors:  Anne-Lyse Ducrest; Mario Amacker; Joachim Lingner; Markus Nabholz
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

2.  Increase of internal ion concentration triggers trehalose synthesis associated with cryptobiosis in larvae of Polypedilum vanderplanki.

Authors:  Masahiko Watanabe; Takahiro Kikawada; Takashi Okuda
Journal:  J Exp Biol       Date:  2003-07       Impact factor: 3.312

3.  Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference.

Authors:  Kumiko Ui-Tei; Yuki Naito; Fumitaka Takahashi; Takeshi Haraguchi; Hiroko Ohki-Hamazaki; Aya Juni; Ryu Ueda; Kaoru Saigo
Journal:  Nucleic Acids Res       Date:  2004-02-09       Impact factor: 16.971

4.  Dehydration-induced expression of LEA proteins in an anhydrobiotic chironomid.

Authors:  Takahiro Kikawada; Yuichi Nakahara; Yasushi Kanamori; Ken-ichi Iwata; Masahiko Watanabe; Brian McGee; Alan Tunnacliffe; Takashi Okuda
Journal:  Biochem Biophys Res Commun       Date:  2006-07-12       Impact factor: 3.575

5.  Trehalose renders the dauer larva of Caenorhabditis elegans resistant to extreme desiccation.

Authors:  Cihan Erkut; Sider Penkov; Hassan Khesbak; Daniela Vorkel; Jean-Marc Verbavatz; Karim Fahmy; Teymuras V Kurzchalia
Journal:  Curr Biol       Date:  2011-07-21       Impact factor: 10.834

6.  Identification of anhydrobiosis-related genes from an expressed sequence tag database in the cryptobiotic midge Polypedilum vanderplanki (Diptera; Chironomidae).

Authors:  Richard Cornette; Yasushi Kanamori; Masahiko Watanabe; Yuichi Nakahara; Oleg Gusev; Kanako Mitsumasu; Keiko Kadono-Okuda; Michihiko Shimomura; Kazuei Mita; Takahiro Kikawada; Takashi Okuda
Journal:  J Biol Chem       Date:  2010-09-10       Impact factor: 5.157

7.  Vitrification is essential for anhydrobiosis in an African chironomid, Polypedilum vanderplanki.

Authors:  Minoru Sakurai; Takao Furuki; Ken-Ichi Akao; Daisuke Tanaka; Yuichi Nakahara; Takahiro Kikawada; Masahiko Watanabe; Takashi Okuda
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-24       Impact factor: 11.205

8.  An abundant LEA protein in the anhydrobiotic midge, PvLEA4, acts as a molecular shield by limiting growth of aggregating protein particles.

Authors:  Rie Hatanaka; Yuka Hagiwara-Komoda; Takao Furuki; Yasushi Kanamori; Mika Fujita; Richard Cornette; Minoru Sakurai; Takashi Okuda; Takahiro Kikawada
Journal:  Insect Biochem Mol Biol       Date:  2013-08-24       Impact factor: 4.714

9.  siDirect 2.0: updated software for designing functional siRNA with reduced seed-dependent off-target effect.

Authors:  Yuki Naito; Jun Yoshimura; Shinichi Morishita; Kumiko Ui-Tei
Journal:  BMC Bioinformatics       Date:  2009-11-30       Impact factor: 3.169

10.  Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge.

Authors:  Oleg Gusev; Yoshitaka Suetsugu; Richard Cornette; Takeshi Kawashima; Maria D Logacheva; Alexey S Kondrashov; Aleksey A Penin; Rie Hatanaka; Shingo Kikuta; Sachiko Shimura; Hiroyuki Kanamori; Yuichi Katayose; Takashi Matsumoto; Elena Shagimardanova; Dmitry Alexeev; Vadim Govorun; Jennifer Wisecaver; Alexander Mikheyev; Ryo Koyanagi; Manabu Fujie; Tomoaki Nishiyama; Shuji Shigenobu; Tomoko F Shibata; Veronika Golygina; Mitsuyasu Hasebe; Takashi Okuda; Nori Satoh; Takahiro Kikawada
Journal:  Nat Commun       Date:  2014-09-12       Impact factor: 14.919

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  11 in total

1.  International Conference on Extremophiles 2016.

Authors:  Garabed Antranikian
Journal:  Extremophiles       Date:  2017-01       Impact factor: 2.395

2.  Cooption of heat shock regulatory system for anhydrobiosis in the sleeping chironomid Polypedilum vanderplanki.

Authors:  Pavel V Mazin; Elena Shagimardanova; Olga Kozlova; Alexander Cherkasov; Roman Sutormin; Vita V Stepanova; Alexey Stupnikov; Maria Logacheva; Aleksey Penin; Yoichiro Sogame; Richard Cornette; Shoko Tokumoto; Yugo Miyata; Takahiro Kikawada; Mikhail S Gelfand; Oleg Gusev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-20       Impact factor: 11.205

Review 3.  Deciphering the Biological Enigma-Genomic Evolution Underlying Anhydrobiosis in the Phylum Tardigrada and the Chironomid Polypedilum vanderplanki.

Authors:  Yuki Yoshida; Sae Tanaka
Journal:  Insects       Date:  2022-06-19       Impact factor: 3.139

4.  Towards water-free biobanks: long-term dry-preservation at room temperature of desiccation-sensitive enzyme luciferase in air-dried insect cells.

Authors:  Shingo Kikuta; Shunsuke J Watanabe; Ryoichi Sato; Oleg Gusev; Alexander Nesmelov; Yoichiro Sogame; Richard Cornette; Takahiro Kikawada
Journal:  Sci Rep       Date:  2017-07-26       Impact factor: 4.379

5.  New group of transmembrane proteins associated with desiccation tolerance in the anhydrobiotic midge Polypedilum vanderplanki.

Authors:  Taisiya A Voronina; Alexander A Nesmelov; Sabina A Kondratyeva; Ruslan M Deviatiiarov; Yugo Miyata; Shoko Tokumoto; Richard Cornette; Oleg A Gusev; Takahiro Kikawada; Elena I Shagimardanova
Journal:  Sci Rep       Date:  2020-07-15       Impact factor: 4.379

6.  Development of a Tet-On Inducible Expression System for the Anhydrobiotic Cell Line, Pv11.

Authors:  Shoko Tokumoto; Yugo Miyata; Kengo Usui; Ruslan Deviatiiarov; Takahiro Ohkawa; Sabina Kondratieva; Elena Shagimardanova; Oleg Gusev; Richard Cornette; Masayoshi Itoh; Yoshihide Hayashizaki; Takahiro Kikawada
Journal:  Insects       Date:  2020-11-11       Impact factor: 2.769

7.  Cas9-mediated genome editing reveals a significant contribution of calcium signaling pathways to anhydrobiosis in Pv11 cells.

Authors:  Yugo Miyata; Hiroto Fuse; Shoko Tokumoto; Yusuke Hiki; Ruslan Deviatiiarov; Yuki Yoshida; Takahiro G Yamada; Richard Cornette; Oleg Gusev; Elena Shagimardanova; Akira Funahashi; Takahiro Kikawada
Journal:  Sci Rep       Date:  2021-10-05       Impact factor: 4.379

8.  Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11.

Authors:  Takahiro G Yamada; Yusuke Hiki; Noriko F Hiroi; Elena Shagimardanova; Oleg Gusev; Richard Cornette; Takahiro Kikawada; Akira Funahashi
Journal:  PLoS One       Date:  2020-03-19       Impact factor: 3.240

9.  Genome-Wide Role of HSF1 in Transcriptional Regulation of Desiccation Tolerance in the Anhydrobiotic Cell Line, Pv11.

Authors:  Shoko Tokumoto; Yugo Miyata; Ruslan Deviatiiarov; Takahiro G Yamada; Yusuke Hiki; Olga Kozlova; Yuki Yoshida; Richard Cornette; Akira Funahashi; Elena Shagimardanova; Oleg Gusev; Takahiro Kikawada
Journal:  Int J Mol Sci       Date:  2021-05-28       Impact factor: 5.923

10.  Identification of Genomic Safe Harbors in the Anhydrobiotic Cell Line, Pv11.

Authors:  Yugo Miyata; Shoko Tokumoto; Tomohiko Arai; Nurislam Shaikhutdinov; Ruslan Deviatiiarov; Hiroto Fuse; Natalia Gogoleva; Sofya Garushyants; Alexander Cherkasov; Alina Ryabova; Guzel Gazizova; Richard Cornette; Elena Shagimardanova; Oleg Gusev; Takahiro Kikawada
Journal:  Genes (Basel)       Date:  2022-02-24       Impact factor: 4.096

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