Literature DB >> 27732792

Cell-Specific Targeting of Genetically Encoded Tools for Neuroscience.

Lucas Sjulson1,2, Daniela Cassataro2, Shamik DasGupta3,4, Gero Miesenböck3.   

Abstract

Genetically encoded tools for visualizing and manipulating neurons in vivo have led to significant advances in neuroscience, in large part because of the ability to target expression to specific cell populations of interest. Current methods enable targeting based on marker gene expression, development, anatomical projection pattern, synaptic connectivity, and recent activity as well as combinations of these factors. Here, we review these methods, focusing on issues of practical implementation as well as areas for future improvement.

Entities:  

Keywords:  actuator; chemogenetics; effector; optogenetics; reporter; transgene expression; viral vector

Mesh:

Year:  2016        PMID: 27732792      PMCID: PMC5630135          DOI: 10.1146/annurev-genet-120215-035011

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  185 in total

1.  Quantitative analysis of the packaging capacity of recombinant adeno-associated virus.

Authors:  J Y Dong; P D Fan; R A Frizzell
Journal:  Hum Gene Ther       Date:  1996-11-10       Impact factor: 5.695

Review 2.  Optical control of neuronal activity.

Authors:  Stephanie Szobota; Ehud Y Isacoff
Journal:  Annu Rev Biophys       Date:  2010       Impact factor: 12.981

3.  Considerations when using cre-driver rodent lines for studying ventral tegmental area circuitry.

Authors:  Garret D Stuber; Alice M Stamatakis; Pranish A Kantak
Journal:  Neuron       Date:  2015-01-21       Impact factor: 17.173

4.  Diversity of transgenic mouse models for selective targeting of midbrain dopamine neurons.

Authors:  Stephan Lammel; Elizabeth E Steinberg; Csaba Földy; Nicholas R Wall; Kevin Beier; Liqun Luo; Robert C Malenka
Journal:  Neuron       Date:  2015-01-21       Impact factor: 17.173

5.  A unique population of ventral tegmental area neurons inhibits the lateral habenula to promote reward.

Authors:  Alice M Stamatakis; Joshua H Jennings; Randall L Ung; Grace A Blair; Richard J Weinberg; Rachael L Neve; Frederick Boyce; Joanna Mattis; Charu Ramakrishnan; Karl Deisseroth; Garret D Stuber
Journal:  Neuron       Date:  2013-11-20       Impact factor: 17.173

6.  The effect of various introns and transcription terminators on the efficiency of expression vectors in various cultured cell lines and in the mammary gland of transgenic mice.

Authors:  D Petitclerc; J Attal; M C Théron; M Bearzotti; P Bolifraud; G Kann; M G Stinnakre; H Pointu; C Puissant; L M Houdebine
Journal:  J Biotechnol       Date:  1995-06-21       Impact factor: 3.307

7.  Targeting cells with single vectors using multiple-feature Boolean logic.

Authors:  Lief E Fenno; Joanna Mattis; Charu Ramakrishnan; Minsuk Hyun; Soo Yeun Lee; Miao He; Jason Tucciarone; Aslihan Selimbeyoglu; Andre Berndt; Logan Grosenick; Kelly A Zalocusky; Hannah Bernstein; Haley Swanson; Chelsey Perry; Ilka Diester; Frederick M Boyce; Caroline E Bass; Rachael Neve; Z Josh Huang; Karl Deisseroth
Journal:  Nat Methods       Date:  2014-06-08       Impact factor: 28.547

8.  FoxP influences the speed and accuracy of a perceptual decision in Drosophila.

Authors:  Shamik DasGupta; Clara Howcroft Ferreira; Gero Miesenböck
Journal:  Science       Date:  2014-05-23       Impact factor: 47.728

9.  Use of the viral 2A peptide for bicistronic expression in transgenic mice.

Authors:  Georgios Trichas; Jo Begbie; Shankar Srinivas
Journal:  BMC Biol       Date:  2008-09-15       Impact factor: 7.431

10.  Permanent genetic access to transiently active neurons via TRAP: targeted recombination in active populations.

Authors:  Casey J Guenthner; Kazunari Miyamichi; Helen H Yang; H Craig Heller; Liqun Luo
Journal:  Neuron       Date:  2013-06-05       Impact factor: 17.173

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  25 in total

Review 1.  Reprogramming cellular functions with engineered membrane proteins.

Authors:  Caroline Arber; Melvin Young; Patrick Barth
Journal:  Curr Opin Biotechnol       Date:  2017-07-11       Impact factor: 9.740

2.  Reducing the Cost of Electrophysiology in the Teaching Laboratory.

Authors:  Robert A Wyttenbach; Bruce R Johnson; Ronald R Hoy
Journal:  J Undergrad Neurosci Educ       Date:  2018-09-15

3.  Genome editing technologies and their potential to treat neurologic disease.

Authors:  Nicolas N Madigan; Nathan P Staff; Anthony J Windebank; Eduardo E Benarroch
Journal:  Neurology       Date:  2017-09-20       Impact factor: 9.910

Review 4.  Optogenetic and chemogenetic techniques for neurogastroenterology.

Authors:  Werend Boesmans; Marlene M Hao; Pieter Vanden Berghe
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2017-11-29       Impact factor: 46.802

Review 5.  Toward a Wiring Diagram Understanding of Appetite Control.

Authors:  Mark L Andermann; Bradford B Lowell
Journal:  Neuron       Date:  2017-08-16       Impact factor: 17.173

6.  Primate optogenetics: Progress and prognosis.

Authors:  Yasmine El-Shamayleh; Gregory D Horwitz
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-23       Impact factor: 11.205

Review 7.  Applications of optogenetic and chemogenetic methods to seizure circuits: Where to go next?

Authors:  Patrick A Forcelli
Journal:  J Neurosci Res       Date:  2017-08-09       Impact factor: 4.164

8.  Probing Synaptic Transmission and Behavior in Drosophila with Optogenetics: A Laboratory Exercise.

Authors:  Ilya Vilinsky; Karen L Hibbard; Bruce R Johnson; David L Deitcher
Journal:  J Undergrad Neurosci Educ       Date:  2018-09-15

Review 9.  Dendritic Spine Elimination: Molecular Mechanisms and Implications.

Authors:  Ivar S Stein; Karen Zito
Journal:  Neuroscientist       Date:  2018-05-02       Impact factor: 7.519

Review 10.  Silencing Neurons: Tools, Applications, and Experimental Constraints.

Authors:  J Simon Wiegert; Mathias Mahn; Matthias Prigge; Yoav Printz; Ofer Yizhar
Journal:  Neuron       Date:  2017-08-02       Impact factor: 17.173

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