Literature DB >> 28772120

Silencing Neurons: Tools, Applications, and Experimental Constraints.

J Simon Wiegert1, Mathias Mahn2, Matthias Prigge2, Yoav Printz2, Ofer Yizhar3.   

Abstract

Reversible silencing of neuronal activity is a powerful approach for isolating the roles of specific neuronal populations in circuit dynamics and behavior. In contrast with neuronal excitation, for which the majority of studies have used a limited number of optogenetic and chemogenetic tools, the number of genetically encoded tools used for inhibition of neuronal activity has vastly expanded. Silencing strategies vary widely in their mechanism of action and in their spatial and temporal scales. Although such manipulations are commonly applied, the design and interpretation of neuronal silencing experiments present unique challenges, both technically and conceptually. Here, we review the most commonly used tools for silencing neuronal activity and provide an in-depth analysis of their mechanism of action and utility for particular experimental applications. We further discuss the considerations that need to be given to experimental design, analysis, and interpretation of collected data. Finally, we discuss future directions for the development of new silencing approaches in neuroscience.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  archaerhodopsin; channelrhodopsin; chemogenetics; halorhodopsin; light-activated G-protein-coupled receptors; light-gated anion channelrhodopsins; neuronal silencing; optogenetics; synaptic transmission

Mesh:

Substances:

Year:  2017        PMID: 28772120      PMCID: PMC5830081          DOI: 10.1016/j.neuron.2017.06.050

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  233 in total

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Authors:  Ilka Diester; Matthew T Kaufman; Murtaza Mogri; Ramin Pashaie; Werapong Goo; Ofer Yizhar; Charu Ramakrishnan; Karl Deisseroth; Krishna V Shenoy
Journal:  Nat Neurosci       Date:  2011-01-30       Impact factor: 24.884

2.  Spontaneous neural activity is required for the establishment and maintenance of the olfactory sensory map.

Authors:  C Ron Yu; Jennifer Power; Gilad Barnea; Sean O'Donnell; Hannah E V Brown; Joseph Osborne; Richard Axel; Joseph A Gogos
Journal:  Neuron       Date:  2004-05-27       Impact factor: 17.173

3.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

4.  Axonal GABAA receptors increase cerebellar granule cell excitability and synaptic activity.

Authors:  Jason R Pugh; Craig E Jahr
Journal:  J Neurosci       Date:  2011-01-12       Impact factor: 6.167

Review 5.  Optogenetic pharmacology for control of native neuronal signaling proteins.

Authors:  Richard H Kramer; Alexandre Mourot; Hillel Adesnik
Journal:  Nat Neurosci       Date:  2013-06-25       Impact factor: 24.884

6.  G protein-coupled inwardly rectifying K+ channels (GIRKs) mediate postsynaptic but not presynaptic transmitter actions in hippocampal neurons.

Authors:  C Lüscher; L Y Jan; M Stoffel; R C Malenka; R A Nicoll
Journal:  Neuron       Date:  1997-09       Impact factor: 17.173

7.  A high-light sensitivity optical neural silencer: development and application to optogenetic control of non-human primate cortex.

Authors:  Xue Han; Brian Y Chow; Huihui Zhou; Nathan C Klapoetke; Amy Chuong; Reza Rajimehr; Aimei Yang; Michael V Baratta; Jonathan Winkle; Robert Desimone; Edward S Boyden
Journal:  Front Syst Neurosci       Date:  2011-04-13

8.  A viral strategy for targeting and manipulating interneurons across vertebrate species.

Authors:  Jordane Dimidschstein; Qian Chen; Robin Tremblay; Stephanie L Rogers; Giuseppe-Antonio Saldi; Lihua Guo; Qing Xu; Runpeng Liu; Congyi Lu; Jianhua Chu; Joshua S Grimley; Anne-Rachel Krostag; Ajamete Kaykas; Michael C Avery; Mohammad S Rashid; Myungin Baek; Amanda L Jacob; Gordon B Smith; Daniel E Wilson; Georg Kosche; Illya Kruglikov; Tomasz Rusielewicz; Vibhakar C Kotak; Todd M Mowery; Stewart A Anderson; Edward M Callaway; Jeremy S Dasen; David Fitzpatrick; Valentina Fossati; Michael A Long; Scott Noggle; John H Reynolds; Dan H Sanes; Bernardo Rudy; Guoping Feng; Gord Fishell
Journal:  Nat Neurosci       Date:  2016-10-31       Impact factor: 24.884

9.  Clozapine N-Oxide Administration Produces Behavioral Effects in Long-Evans Rats: Implications for Designing DREADD Experiments.

Authors:  Duncan A A MacLaren; Richard W Browne; Jessica K Shaw; Sandhya Krishnan Radhakrishnan; Prachi Khare; Rodrigo A España; Stewart D Clark
Journal:  eNeuro       Date:  2016-11-01

10.  Dorso-Lateral Frontal Cortex of the Ferret Encodes Perceptual Difficulty during Visual Discrimination.

Authors:  Zhe Charles Zhou; Chunxiu Yu; Kristin K Sellers; Flavio Fröhlich
Journal:  Sci Rep       Date:  2016-03-30       Impact factor: 4.379

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  105 in total

1.  Circuits That Mediate Expression of Signaled Active Avoidance Converge in the Pedunculopontine Tegmentum.

Authors:  Sebastian Hormigo; German Vega-Flores; Victor Rovira; Manuel A Castro-Alamancos
Journal:  J Neurosci       Date:  2019-04-01       Impact factor: 6.167

Review 2.  Wiring the depressed brain: optogenetic and chemogenetic circuit interrogation in animal models of depression.

Authors:  Jessie Muir; Joëlle Lopez; Rosemary C Bagot
Journal:  Neuropsychopharmacology       Date:  2018-12-05       Impact factor: 7.853

3.  Optogenetic Modulation of Ion Channels by Photoreceptive Proteins.

Authors:  Hisao Tsukamoto; Yuji Furutani
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

4.  History and Perspectives of Ion-Transporting Rhodopsins.

Authors:  Hideki Kandori
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

5.  Structure-Function Relationship of Channelrhodopsins.

Authors:  Hideaki E Kato
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

6.  Basal Ganglia Output Has a Permissive Non-Driving Role in a Signaled Locomotor Action Mediated by the Midbrain.

Authors:  Sebastian Hormigo; Ji Zhou; Dorian Chabbert; Bharanidharan Shanmugasundaram; Manuel A Castro-Alamancos
Journal:  J Neurosci       Date:  2020-12-16       Impact factor: 6.167

7.  Bidirectional optical neuromodulation using capacitive charge-transfer.

Authors:  Rustamzhon Melikov; Shashi Bhushan Srivastava; Onuralp Karatum; Itir Bakis Dogru-Yuksel; Ugur Meric Dikbas; Ibrahim Halil Kavakli; Sedat Nizamoglu
Journal:  Biomed Opt Express       Date:  2020-10-05       Impact factor: 3.732

8.  Mouse Parabrachial Neurons Signal a Relationship between Bitter Taste and Nociceptive Stimuli.

Authors:  Jinrong Li; Christian H Lemon
Journal:  J Neurosci       Date:  2019-01-03       Impact factor: 6.167

9.  Contemporary strategies for dissecting the neuronal basis of neurodevelopmental disorders.

Authors:  Dong-Oh Seo; Laura E Motard; Michael R Bruchas
Journal:  Neurobiol Learn Mem       Date:  2018-03-14       Impact factor: 2.877

10.  A Photoactivatable Botulinum Neurotoxin for Inducible Control of Neurotransmission.

Authors:  Qi Liu; Brooke L Sinnen; Emma E Boxer; Martin W Schneider; Michael J Grybko; William C Buchta; Emily S Gibson; Christina L Wysoczynski; Christopher P Ford; Alexander Gottschalk; Jason Aoto; Chandra L Tucker; Matthew J Kennedy
Journal:  Neuron       Date:  2019-01-28       Impact factor: 17.173

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