Literature DB >> 27729450

Power Stroke Angular Velocity Profiles of Archaeal A-ATP Synthase Versus Thermophilic and Mesophilic F-ATP Synthase Molecular Motors.

Hendrik Sielaff1, James Martin2, Dhirendra Singh1, Goran Biuković1, Gerhard Grüber3, Wayne D Frasch4.   

Abstract

The angular velocities of ATPase-dependent power strokes as a function of the rotational position for the A-type molecular motor A3B3DF, from the Methanosarcina mazei Gö1 A-ATP synthase, and the thermophilic motor α3β3γ, from Geobacillus stearothermophilus (formerly known as Bacillus PS3) F-ATP synthase, are resolved at 5 μs resolution for the first time. Unexpectedly, the angular velocity profile of the A-type was closely similar in the angular positions of accelerations and decelerations to the profiles of the evolutionarily distant F-type motors of thermophilic and mesophilic origins, and they differ only in the magnitude of their velocities. M. mazei A3B3DF power strokes occurred in 120° steps at saturating ATP concentrations like the F-type motors. However, because ATP-binding dwells did not interrupt the 120° steps at limiting ATP, ATP binding to A3B3DF must occur during the catalytic dwell. Elevated concentrations of ADP did not increase dwells occurring 40° after the catalytic dwell. In F-type motors, elevated ADP induces dwells 40° after the catalytic dwell and slows the overall velocity. The similarities in these power stroke profiles are consistent with a common rotational mechanism for A-type and F-type rotary motors, in which the angular velocity is limited by the rotary position at which ATP binding occurs and by the drag imposed on the axle as it rotates within the ring of stator subunits.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  A-ATP synthase; ATP synthase; F-ATP synthase; F1FO-ATPase; angular velocity; bioenergetics; molecular motor; power stroke; single molecule biophysics; single molecule rotation

Mesh:

Substances:

Year:  2016        PMID: 27729450      PMCID: PMC5207238          DOI: 10.1074/jbc.M116.745240

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

1.  Structure of bovine mitochondrial F(1)-ATPase with nucleotide bound to all three catalytic sites: implications for the mechanism of rotary catalysis.

Authors:  R I Menz; J E Walker; A G Leslie
Journal:  Cell       Date:  2001-08-10       Impact factor: 41.582

2.  Evidence for rotation of V1-ATPase.

Authors:  Hiromi Imamura; Masahiro Nakano; Hiroyuki Noji; Eiro Muneyuki; Shoji Ohkuma; Masasuke Yoshida; Ken Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-21       Impact factor: 11.205

3.  Defined subcomplexes of the A1 ATPase from the archaeon Methanosarcina mazei Gö1: biochemical properties and redox regulation.

Authors:  Thorsten Lemker; Gerhard Grüber; Roland Schmid; Volker Müller
Journal:  FEBS Lett       Date:  2003-06-05       Impact factor: 4.124

4.  Microsecond time scale rotation measurements of single F1-ATPase molecules.

Authors:  David Spetzler; Justin York; Douglas Daniel; Raimund Fromme; David Lowry; Wayne Frasch
Journal:  Biochemistry       Date:  2006-03-14       Impact factor: 3.162

5.  How subunit coupling produces the gamma-subunit rotary motion in F1-ATPase.

Authors:  Jingzhi Pu; Martin Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

6.  The molecular motor F-ATP synthase is targeted by the tumoricidal protein HAMLET.

Authors:  James Ho; Hendrik Sielaff; Aftab Nadeem; Catharina Svanborg; Gerhard Grüber
Journal:  J Mol Biol       Date:  2015-02-11       Impact factor: 5.469

7.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

8.  The stimulating role of subunit F in ATPase activity inside the A1-complex of the Methanosarcina mazei Gö1 A1AO ATP synthase.

Authors:  Dhirendra Singh; Hendrik Sielaff; Lavanya Sundararaman; Shashi Bhushan; Gerhard Grüber
Journal:  Biochim Biophys Acta       Date:  2015-12-09

9.  Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.

Authors:  Anil Kumar; Malathy Sony Subramanian Manimekalai; Asha Manikkoth Balakrishna; Jeyaraman Jeyakanthan; Gerhard Grüber
Journal:  J Mol Biol       Date:  2009-11-26       Impact factor: 5.469

Review 10.  Torque generation and elastic power transmission in the rotary F(O)F(1)-ATPase.

Authors:  Wolfgang Junge; Hendrik Sielaff; Siegfried Engelbrecht
Journal:  Nature       Date:  2009-05-21       Impact factor: 49.962

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  12 in total

1.  Method to extract multiple states in F1-ATPase rotation experiments from jump distributions.

Authors:  Sándor Volkán-Kacsó; Luan Q Le; Kaicheng Zhu; Haibin Su; Rudolph A Marcus
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-27       Impact factor: 11.205

2.  Elastic coupling power stroke mechanism of the F1-ATPase molecular motor.

Authors:  James L Martin; Robert Ishmukhametov; David Spetzler; Tassilo Hornung; Wayne D Frasch
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-14       Impact factor: 11.205

3.  Tight Chemomechanical Coupling of the F1 Motor Relies on Structural Stability.

Authors:  Mana Tanaka; Tomohiro Kawakami; Tomoaki Okaniwa; Yohei Nakayama; Shoichi Toyabe; Hiroshi Ueno; Eiro Muneyuki
Journal:  Biophys J       Date:  2020-05-29       Impact factor: 4.033

4.  The uniqueness of subunit α of mycobacterial F-ATP synthases: An evolutionary variant for niche adaptation.

Authors:  Priya Ragunathan; Hendrik Sielaff; Lavanya Sundararaman; Goran Biuković; Malathy Sony Subramanian Manimekalai; Dhirendra Singh; Subhashri Kundu; Thorsten Wohland; Wayne Frasch; Thomas Dick; Gerhard Grüber
Journal:  J Biol Chem       Date:  2017-05-11       Impact factor: 5.157

Review 5.  F1FO ATP synthase molecular motor mechanisms.

Authors:  Wayne D Frasch; Zain A Bukhari; Seiga Yanagisawa
Journal:  Front Microbiol       Date:  2022-08-23       Impact factor: 6.064

Review 6.  Catalytic robustness and torque generation of the F1-ATPase.

Authors:  Hiroyuki Noji; Hiroshi Ueno; Duncan G G McMillan
Journal:  Biophys Rev       Date:  2017-03-25

7.  Single-molecule analysis reveals rotational substeps and chemo-mechanical coupling scheme of Enterococcus hirae V1-ATPase.

Authors:  Tatsuya Iida; Yoshihiro Minagawa; Hiroshi Ueno; Fumihiro Kawai; Takeshi Murata; Ryota Iino
Journal:  J Biol Chem       Date:  2019-09-13       Impact factor: 5.157

8.  The 3 × 120° rotary mechanism of Paracoccus denitrificans F1-ATPase is different from that of the bacterial and mitochondrial F1-ATPases.

Authors:  Mariel Zarco-Zavala; Ryo Watanabe; Duncan G G McMillan; Toshiharu Suzuki; Hiroshi Ueno; Francisco Mendoza-Hoffmann; José J García-Trejo; Hiroyuki Noji
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-09       Impact factor: 11.205

9.  pH-dependent 11° F1FO ATP synthase sub-steps reveal insight into the FO torque generating mechanism.

Authors:  Seiga Yanagisawa; Wayne D Frasch
Journal:  Elife       Date:  2021-12-31       Impact factor: 8.140

Review 10.  Structural Asymmetry and Kinetic Limping of Single Rotary F-ATP Synthases.

Authors:  Hendrik Sielaff; Seiga Yanagisawa; Wayne D Frasch; Wolfgang Junge; Michael Börsch
Journal:  Molecules       Date:  2019-01-30       Impact factor: 4.411

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