Literature DB >> 27704531

Greedy outcome weighted tree learning of optimal personalized treatment rules.

Ruoqing Zhu1, Ying-Qi Zhao2, Guanhua Chen3, Shuangge Ma4, Hongyu Zhao4.   

Abstract

We propose a subgroup identification approach for inferring optimal and interpretable personalized treatment rules with high-dimensional covariates. Our approach is based on a two-step greedy tree algorithm to pursue signals in a high-dimensional space. In the first step, we transform the treatment selection problem into a weighted classification problem that can utilize tree-based methods. In the second step, we adopt a newly proposed tree-based method, known as reinforcement learning trees, to detect features involved in the optimal treatment rules and to construct binary splitting rules. The method is further extended to right censored survival data by using the accelerated failure time model and introducing double weighting to the classification trees. The performance of the proposed method is demonstrated via simulation studies, as well as analyses of the Cancer Cell Line Encyclopedia (CCLE) data and the Tamoxifen breast cancer data.
© 2016, The International Biometric Society.

Entities:  

Keywords:  High-dimensional data; Optimal treatment rules; Personalized medicine; Reinforcement learning trees; Survival analysis; Tree-based method

Mesh:

Year:  2016        PMID: 27704531      PMCID: PMC5378692          DOI: 10.1111/biom.12593

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  29 in total

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4.  Regularized estimation in the accelerated failure time model with high-dimensional covariates.

Authors:  Jian Huang; Shuangge Ma; Huiliang Xie
Journal:  Biometrics       Date:  2006-09       Impact factor: 2.571

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6.  Subgroup identification based on differential effect search--a recursive partitioning method for establishing response to treatment in patient subpopulations.

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8.  Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade.

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Journal:  J Clin Oncol       Date:  2007-04-01       Impact factor: 44.544

9.  Improving propensity score weighting using machine learning.

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Journal:  Stat Med       Date:  2010-02-10       Impact factor: 2.373

Review 10.  Role of biologic therapy and chemotherapy in hormone receptor- and HER2-positive breast cancer.

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Journal:  Ann Oncol       Date:  2009-01-15       Impact factor: 32.976

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  9 in total

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2.  Constructing dynamic treatment regimes with shared parameters for censored data.

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5.  Using Administrative Data to Predict Suicide After Psychiatric Hospitalization in the Veterans Health Administration System.

Authors:  Ronald C Kessler; Mark S Bauer; Todd M Bishop; Olga V Demler; Steven K Dobscha; Sarah M Gildea; Joseph L Goulet; Elizabeth Karras; Julie Kreyenbuhl; Sara J Landes; Howard Liu; Alex R Luedtke; Patrick Mair; William H B McAuliffe; Matthew Nock; Maria Petukhova; Wilfred R Pigeon; Nancy A Sampson; Jordan W Smoller; Lauren M Weinstock; Robert M Bossarte
Journal:  Front Psychiatry       Date:  2020-05-06       Impact factor: 4.157

6.  Learning dynamic treatment strategies for coronary heart diseases by artificial intelligence: real-world data-driven study.

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7.  dipm: an R package implementing the Depth Importance in Precision Medicine (DIPM) tree and Forest-based method.

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8.  Near-optimal Individualized Treatment Recommendations.

Authors:  Haomiao Meng; Ying-Qi Zhao; Haoda Fu; Xingye Qiao
Journal:  J Mach Learn Res       Date:  2020       Impact factor: 5.177

9.  Development and Validation of a Machine Learning Individualized Treatment Rule in First-Episode Schizophrenia.

Authors:  Chi-Shin Wu; Alex R Luedtke; Ekaterina Sadikova; Hui-Ju Tsai; Shih-Cheng Liao; Chen-Chung Liu; Susan Shur-Fen Gau; Tyler J VanderWeele; Ronald C Kessler
Journal:  JAMA Netw Open       Date:  2020-02-05
  9 in total

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