Literature DB >> 27701007

Time is ripe: maturation of metabolomics in chronobiology.

Seth D Rhoades1, Arjun Sengupta1, Aalim M Weljie2.   

Abstract

Sleep and circadian rhythms studies have recently benefited from metabolomics analyses, uncovering new connections between chronobiology and metabolism. From untargeted mass spectrometry to quantitative nuclear magnetic resonance spectroscopy, a diversity of analytical approaches has been applied for biomarker discovery in the field. In this review we consider advances in the application of metabolomics technologies which have uncovered significant effects of sleep and circadian cycles on several metabolites, namely phosphatidylcholine species, medium-chain carnitines, and aromatic amino acids. Study design and data processing measures essential for detecting rhythmicity in metabolomics data are also discussed. Future developments in these technologies are anticipated vis-à-vis validating early findings, given metabolomics has only recently entered the ring with other systems biology assessments in chronometabolism studies.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27701007      PMCID: PMC5305625          DOI: 10.1016/j.copbio.2016.09.007

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  55 in total

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4.  Bayesian deconvolution and quantification of metabolites in complex 1D NMR spectra using BATMAN.

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5.  Twenty-four hour pattern of the episodic secretion of cortisol in normal subjects.

Authors:  E D Weitzman; D Fukushima; C Nogeire; H Roffwarg; T F Gallagher; L Hellman
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6.  Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA.

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8.  Circadian clocks and feeding time regulate the oscillations and levels of hepatic triglycerides.

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Journal:  Sleep Sci       Date:  2015-02-23
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Authors:  Robert S Thompson; Fernando Vargas; Pieter C Dorrestein; Maciej Chichlowski; Brian M Berg; Monika Fleshner
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Review 5.  Circadian and Sleep Metabolomics Across Species.

Authors:  Dania M Malik; Georgios K Paschos; Amita Sehgal; Aalim M Weljie
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  5 in total

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