Literature DB >> 27693891

Convergent biosynthetic pathways to β-lactam antibiotics.

Craig A Townsend1.   

Abstract

Five naturally-occurring families of β-lactams have inspired a class of drugs that constitute >60% of the antimicrobials used in human medicine. Their biosynthetic pathways reveal highly individualized synthetic strategies that yet converge on a common azetidinone ring assembled in structural contexts that confer selective binding and inhibition of d,d-transpeptidases that play essential roles in bacterial cell wall (peptidoglycan) biosynthesis. These enzymes belong to a single 'clan' of evolutionarily distinct serine hydrolases whose active site geometry and mechanism of action is specifically matched by these antibiotics for inactivation that is kinetically competitive with their native function. Unusual enzyme-mediated reactions and catalytic multitasking in these pathways are discussed with particular attention to the diverse ways the β-lactam itself is generated, and more broadly how the intrinsic reactivity of this core structural element is modulated in natural systems through the introduction of ring strain and electronic effects.
Copyright © 2016. Published by Elsevier Ltd.

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Year:  2016        PMID: 27693891      PMCID: PMC5161666          DOI: 10.1016/j.cbpa.2016.09.013

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  46 in total

1.  Chapter 13. Nonribosomal peptide synthetases mechanistic and structural aspects of essential domains.

Authors:  M A Marahiel; L-O Essen
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

2.  In vivo characterization of nonribosomal peptide synthetases NocA and NocB in the biosynthesis of nocardicin A.

Authors:  Jeanne M Davidsen; Craig A Townsend
Journal:  Chem Biol       Date:  2012-02-24

3.  Intrinsic evolutionary constraints on protease structure, enzyme acylation, and the identity of the catalytic triad.

Authors:  Andrew R Buller; Craig A Townsend
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

4.  Structure of beta-lactam synthetase reveals how to synthesize antibiotics instead of asparagine.

Authors:  M T Miller; B O Bachmann; C A Townsend; A C Rosenzweig
Journal:  Nat Struct Biol       Date:  2001-08

5.  Definition of the common and divergent steps in carbapenem β-lactam antibiotic biosynthesis.

Authors:  Micah J Bodner; Rongfeng Li; Ryan M Phelan; Michael F Freeman; Kristos A Moshos; Evan P Lloyd; Craig A Townsend
Journal:  Chembiochem       Date:  2011-08-24       Impact factor: 3.164

6.  Activation of the pacidamycin PacL adenylation domain by MbtH-like proteins.

Authors:  Wenjun Zhang; John R Heemstra; Christopher T Walsh; Heidi J Imker
Journal:  Biochemistry       Date:  2010-11-01       Impact factor: 3.162

7.  The biosynthetic gene cluster for a monocyclic beta-lactam antibiotic, nocardicin A.

Authors:  Michele Gunsior; Steven D Breazeale; Amanda J Lind; Jacques Ravel; James W Janc; Craig A Townsend
Journal:  Chem Biol       Date:  2004-07

8.  Non-ribosomal propeptide precursor in nocardicin A biosynthesis predicted from adenylation domain specificity dependent on the MbtH family protein NocI.

Authors:  Jeanne M Davidsen; David M Bartley; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2013-01-18       Impact factor: 15.419

9.  Identification and characterization of the carbapenem MM 4550 and its gene cluster in Streptomyces argenteolus ATCC 11009.

Authors:  Rongfeng Li; Evan P Lloyd; Kristos A Moshos; Craig A Townsend
Journal:  Chembiochem       Date:  2014-01-13       Impact factor: 3.164

10.  Twenty years of the MEROPS database of proteolytic enzymes, their substrates and inhibitors.

Authors:  Neil D Rawlings; Alan J Barrett; Robert Finn
Journal:  Nucleic Acids Res       Date:  2015-11-02       Impact factor: 16.971

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  15 in total

1.  Methylations in complex carbapenem biosynthesis are catalyzed by a single cobalamin-dependent radical S-adenosylmethionine enzyme.

Authors:  Erica K Sinner; Michael S Lichstrahl; Rongfeng Li; Daniel R Marous; Craig A Townsend
Journal:  Chem Commun (Camb)       Date:  2019-12-10       Impact factor: 6.222

Review 2.  Recent Advances in Enzymatic Complexity Generation: Cyclization Reactions.

Authors:  Christopher T Walsh; Yi Tang
Journal:  Biochemistry       Date:  2017-12-20       Impact factor: 3.162

Review 3.  Comparison of Antibiotic Resistance Mechanisms in Antibiotic-Producing and Pathogenic Bacteria.

Authors:  Hiroshi Ogawara
Journal:  Molecules       Date:  2019-09-21       Impact factor: 4.411

4.  Bifunctional Nitrone-Conjugated Secondary Metabolite Targeting the Ribosome.

Authors:  Emilianne M Limbrick; Michael Graf; Dagmara K Derewacz; Fabian Nguyen; Jeffrey M Spraggins; Maximiliane Wieland; Audrey E Ynigez-Gutierrez; Benjamin J Reisman; Boris Zinshteyn; Kathryn M McCulloch; T M Iverson; Rachel Green; Daniel N Wilson; Brian O Bachmann
Journal:  J Am Chem Soc       Date:  2020-10-19       Impact factor: 15.419

Review 5.  Comparison of Strategies to Overcome Drug Resistance: Learning from Various Kingdoms.

Authors:  Hiroshi Ogawara
Journal:  Molecules       Date:  2018-06-18       Impact factor: 4.411

6.  ThnL, a B12-dependent radical S-adenosylmethionine enzyme, catalyzes thioether bond formation in carbapenem biosynthesis.

Authors:  Erica K Sinner; Rongfeng Li; Daniel R Marous; Craig A Townsend
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-15       Impact factor: 12.779

7.  Purification and characterization of sequential cobalamin-dependent radical SAM methylases ThnK and TokK in carbapenem β-lactam antibiotic biosynthesis.

Authors:  Erica K Sinner; Craig A Townsend
Journal:  Methods Enzymol       Date:  2021-10-26       Impact factor: 1.682

8.  Competing off-loading mechanisms of meropenem from an l,d-transpeptidase reduce antibiotic effectiveness.

Authors:  Trevor A Zandi; Craig A Townsend
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-06       Impact factor: 11.205

Review 9.  Activation modes in biocatalytic radical cyclization reactions.

Authors:  Yuxuan Ye; Haigen Fu; Todd K Hyster
Journal:  J Ind Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.258

10.  Monobactam formation in sulfazecin by a nonribosomal peptide synthetase thioesterase.

Authors:  Ryan A Oliver; Rongfeng Li; Craig A Townsend
Journal:  Nat Chem Biol       Date:  2017-11-20       Impact factor: 15.040

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