Literature DB >> 19374989

Chapter 13. Nonribosomal peptide synthetases mechanistic and structural aspects of essential domains.

M A Marahiel1, L-O Essen.   

Abstract

A widespread class of therapeutically important natural products is of peptidic origin. They are produced nonribosomally by large "assembly line"-like multienzyme complexes, the nonribosomal peptide synthetases (NRPS). In contrast to ribosomal peptide synthesis, nonribosomally assembled peptides contain unique structural features such as D-amino acids, N-terminally attached fatty acid chains, N- and C-methylated amino acids, N-formylated residues, heterocyclic elements, glycosylated amino acids, and phosphorylated residues. In recent research using genetic, biochemical, and structural methods, experiments have revealed profound insights into the molecular mechanism of nonribosomal peptide synthesis. Based on this, it was possible to alter existing nonribosomally produced peptides either by changing their biosynthetic templates or by the combined action of chemical peptide synthesis and subsequent enzyme catalysis. An overview of the structural aspects of the NRPS machinery with a focus on mechanistic and structural aspects of essential domains is presented.

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Year:  2009        PMID: 19374989     DOI: 10.1016/S0076-6879(09)04813-7

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  27 in total

1.  Creating novel protein scripts beyond natural alphabets.

Authors:  Anil Kumar; Vibin Ramakrishnan
Journal:  Syst Synth Biol       Date:  2011-03-01

2.  Diversity of monomers in nonribosomal peptides: towards the prediction of origin and biological activity.

Authors:  Ségolène Caboche; Valérie Leclère; Maude Pupin; Gregory Kucherov; Philippe Jacques
Journal:  J Bacteriol       Date:  2010-08-06       Impact factor: 3.490

Review 3.  Origin and evolution of the ribosome.

Authors:  George E Fox
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

4.  Significant natural product biosynthetic potential of actinorhizal symbionts of the genus frankia, as revealed by comparative genomic and proteomic analyses.

Authors:  Daniel W Udwary; Erin A Gontang; Adam C Jones; Carla S Jones; Andrew W Schultz; Jaclyn M Winter; Jane Y Yang; Nicholas Beauchemin; Todd L Capson; Benjamin R Clark; Eduardo Esquenazi; Alessandra S Eustáquio; Kelle Freel; Lena Gerwick; William H Gerwick; David Gonzalez; Wei-Ting Liu; Karla L Malloy; Katherine N Maloney; Markus Nett; Joshawna K Nunnery; Kevin Penn; Alejandra Prieto-Davo; Thomas L Simmons; Sara Weitz; Micheal C Wilson; Louis S Tisa; Pieter C Dorrestein; Bradley S Moore
Journal:  Appl Environ Microbiol       Date:  2011-04-15       Impact factor: 4.792

5.  Structure determination of the functional domain interaction of a chimeric nonribosomal peptide synthetase from a challenging crystal with noncrystallographic translational symmetry.

Authors:  Jesse A Sundlov; Andrew M Gulick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-07-18

6.  Enzymology: Modular biosynthesis branches out.

Authors:  Craig A Townsend
Journal:  Nature       Date:  2013-09-18       Impact factor: 49.962

Review 7.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

Review 8.  Daptomycin, a bacterial lipopeptide synthesized by a nonribosomal machinery.

Authors:  Lars Robbel; Mohamed A Marahiel
Journal:  J Biol Chem       Date:  2010-06-03       Impact factor: 5.157

9.  Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis.

Authors:  Eric J Drake; Benjamin P Duckworth; João Neres; Courtney C Aldrich; Andrew M Gulick
Journal:  Biochemistry       Date:  2010-11-02       Impact factor: 3.162

Review 10.  Convergent biosynthetic pathways to β-lactam antibiotics.

Authors:  Craig A Townsend
Journal:  Curr Opin Chem Biol       Date:  2016-09-29       Impact factor: 8.822

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