Literature DB >> 27692431

The Chromatin Landscape of Cellular Senescence.

Steven W Criscione1, Yee Voan Teo1, Nicola Neretti2.   

Abstract

Cellular senescence, an irreversible growth arrest triggered by a variety of stressors, plays important roles in normal physiology and tumor suppression, but accumulation of senescent cells with age contributes to the functional decline of tissues. Senescent cells undergo dramatic alterations to their chromatin landscape that affect genome accessibility and their transcriptional program. These include the loss of DNA-nuclear lamina interactions, the distension of centromeres, and changes in chromatin composition that can lead to the activation of retrotransposons. Here we discuss these findings, as well as recent advances in microscopy and genomics that have revealed the importance of the higher-order spatial organization of the genome in defining and maintaining the senescent state.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA damage; Hi-C; aging; cellular senescence; chromatin; chromosome structure

Mesh:

Substances:

Year:  2016        PMID: 27692431      PMCID: PMC5235059          DOI: 10.1016/j.tig.2016.09.005

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  102 in total

1.  Lamin a truncation in Hutchinson-Gilford progeria.

Authors:  Annachiara De Sandre-Giovannoli; Rafaëlle Bernard; Pierre Cau; Claire Navarro; Jeanne Amiel; Irène Boccaccio; Stanislas Lyonnet; Colin L Stewart; Arnold Munnich; Martine Le Merrer; Nicolas Lévy
Journal:  Science       Date:  2003-04-17       Impact factor: 47.728

2.  MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks.

Authors:  Manuel Stucki; Julie A Clapperton; Duaa Mohammad; Michael B Yaffe; Stephen J Smerdon; Stephen P Jackson
Journal:  Cell       Date:  2005-12-29       Impact factor: 41.582

3.  Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging.

Authors:  Dale K Shumaker; Thomas Dechat; Alexander Kohlmaier; Stephen A Adam; Matthew R Bozovsky; Michael R Erdos; Maria Eriksson; Anne E Goldman; Satya Khuon; Francis S Collins; Thomas Jenuwein; Robert D Goldman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-31       Impact factor: 11.205

4.  Genome reorganization during aging of dividing cells.

Authors:  A Macieira-Coelho; F Puvion-Dutilleul
Journal:  Adv Exp Med Biol       Date:  1985       Impact factor: 2.622

5.  A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation.

Authors:  Masashi Narita; Masako Narita; Valery Krizhanovsky; Sabrina Nuñez; Agustin Chicas; Stephen A Hearn; Michael P Myers; Scott W Lowe
Journal:  Cell       Date:  2006-08-11       Impact factor: 41.582

Review 6.  The senescence-associated secretory phenotype: the dark side of tumor suppression.

Authors:  Jean-Philippe Coppé; Pierre-Yves Desprez; Ana Krtolica; Judith Campisi
Journal:  Annu Rev Pathol       Date:  2010       Impact factor: 23.472

7.  Lamin B1 fluctuations have differential effects on cellular proliferation and senescence.

Authors:  Oliver Dreesen; Alexandre Chojnowski; Peh Fern Ong; Tian Yun Zhao; John E Common; Declan Lunny; E Birgitte Lane; Shu Jin Lee; Leah A Vardy; Colin L Stewart; Alan Colman
Journal:  J Cell Biol       Date:  2013-02-25       Impact factor: 10.539

8.  Global reorganization of the nuclear landscape in senescent cells.

Authors:  Tamir Chandra; Philip Andrew Ewels; Stefan Schoenfelder; Mayra Furlan-Magaril; Steven William Wingett; Kristina Kirschner; Jean-Yves Thuret; Simon Andrews; Peter Fraser; Wolf Reik
Journal:  Cell Rep       Date:  2015-01-29       Impact factor: 9.423

9.  Naturally occurring p16(Ink4a)-positive cells shorten healthy lifespan.

Authors:  Darren J Baker; Bennett G Childs; Matej Durik; Melinde E Wijers; Cynthia J Sieben; Jian Zhong; Rachel A Saltness; Karthik B Jeganathan; Grace Casaclang Verzosa; Abdulmohammad Pezeshki; Khashayarsha Khazaie; Jordan D Miller; Jan M van Deursen
Journal:  Nature       Date:  2016-02-03       Impact factor: 49.962

10.  Oncogene-induced telomere dysfunction enforces cellular senescence in human cancer precursor lesions.

Authors:  Anitha Suram; Jessica Kaplunov; Priyanka L Patel; Haihe Ruan; Aurora Cerutti; Virginia Boccardi; Marzia Fumagalli; Raffaella Di Micco; Neena Mirani; Resham Lal Gurung; Manoor Prakash Hande; Fabrizio d'Adda di Fagagna; Utz Herbig
Journal:  EMBO J       Date:  2012-05-08       Impact factor: 11.598

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  42 in total

Review 1.  Cellular Senescence: The Trojan Horse in Chronic Lung Diseases.

Authors:  Shruthi Hamsanathan; Jonathan K Alder; Jacobo Sellares; Mauricio Rojas; Aditi U Gurkar; Ana L Mora
Journal:  Am J Respir Cell Mol Biol       Date:  2019-07       Impact factor: 6.914

2.  Aberrant Function of the C-Terminal Tail of HIST1H1E Accelerates Cellular Senescence and Causes Premature Aging.

Authors:  Elisabetta Flex; Simone Martinelli; Anke Van Dijck; Andrea Ciolfi; Serena Cecchetti; Elisa Coluzzi; Luca Pannone; Cristina Andreoli; Francesca Clementina Radio; Simone Pizzi; Giovanna Carpentieri; Alessandro Bruselles; Giuseppina Catanzaro; Lucia Pedace; Evelina Miele; Elena Carcarino; Xiaoyan Ge; Chieko Chijiwa; M E Suzanne Lewis; Marije Meuwissen; Sandra Kenis; Nathalie Van der Aa; Austin Larson; Kathleen Brown; Melissa P Wasserstein; Brian G Skotko; Amber Begtrup; Richard Person; Maria Karayiorgou; J Louw Roos; Koen L Van Gassen; Marije Koopmans; Emilia K Bijlsma; Gijs W E Santen; Daniela Q C M Barge-Schaapveld; Claudia A L Ruivenkamp; Mariette J V Hoffer; Seema R Lalani; Haley Streff; William J Craigen; Brett H Graham; Annette P M van den Elzen; Daan J Kamphuis; Katrin Õunap; Karit Reinson; Sander Pajusalu; Monica H Wojcik; Clara Viberti; Cornelia Di Gaetano; Enrico Bertini; Simona Petrucci; Alessandro De Luca; Rossella Rota; Elisabetta Ferretti; Giuseppe Matullo; Bruno Dallapiccola; Antonella Sgura; Magdalena Walkiewicz; R Frank Kooy; Marco Tartaglia
Journal:  Am J Hum Genet       Date:  2019-08-22       Impact factor: 11.025

Review 3.  Nuclear Dynamics of Heterochromatin Repair.

Authors:  Nuno Amaral; Taehyun Ryu; Xiao Li; Irene Chiolo
Journal:  Trends Genet       Date:  2017-01-16       Impact factor: 11.639

Review 4.  Epithelial cell senescence: an adaptive response to pre-carcinogenic stresses?

Authors:  Corinne Abbadie; Olivier Pluquet; Albin Pourtier
Journal:  Cell Mol Life Sci       Date:  2017-07-13       Impact factor: 9.261

5.  Senescent mesenchymal stem cells remodel extracellular matrix driving breast cancer cells to a more-invasive phenotype.

Authors:  Deepraj Ghosh; Carolina Mejia Pena; Nhat Quach; Botai Xuan; Amy H Lee; Michelle R Dawson
Journal:  J Cell Sci       Date:  2020-01-23       Impact factor: 5.285

6.  NF-κB signaling controls H3K9me3 levels at intronic LINE-1 and hematopoietic stem cell genes in cis.

Authors:  Donia Hidaoui; Anne Stolz; Françoise Porteu; Emilie Elvira-Matelot; Yanis Pelinski; François Hermetet; Rabie Chelbi; M'boyba Khadija Diop; Amir M Chioukh
Journal:  J Exp Med       Date:  2022-07-08       Impact factor: 17.579

Review 7.  The three-dimensional organization of the genome in cellular senescence and age-associated diseases.

Authors:  Shane A Evans; Jeremy Horrell; Nicola Neretti
Journal:  Semin Cell Dev Biol       Date:  2018-07-27       Impact factor: 7.727

Review 8.  Loss of chromatin structural integrity is a source of stress during aging.

Authors:  Ruofan Yu; Brenna McCauley; Weiwei Dang
Journal:  Hum Genet       Date:  2020-01-03       Impact factor: 4.132

9.  The loss of heterochromatin is associated with multiscale three-dimensional genome reorganization and aberrant transcription during cellular senescence.

Authors:  Xianglin Zhang; Xuehui Liu; Zhenhai Du; Lei Wei; Huan Fang; Qiongye Dong; Jing Niu; Yanda Li; Juntao Gao; Michael Q Zhang; Wei Xie; Xiaowo Wang
Journal:  Genome Res       Date:  2021-06-17       Impact factor: 9.043

Review 10.  Vascular Endothelial Senescence: Pathobiological Insights, Emerging Long Noncoding RNA Targets, Challenges and Therapeutic Opportunities.

Authors:  Xinghui Sun; Mark W Feinberg
Journal:  Front Physiol       Date:  2021-06-16       Impact factor: 4.566

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