| Literature DB >> 27687591 |
Chaoyi Xu1, Jinhong Zhu2, Wen Fu3, Zongwen Liang1, Shujie Song4, Yuan Zhao1, Lihua Lyu4, Anqi Zhang1, Jing He1,3, Ping Duan1.
Abstract
Mouse double minute 4 (MDM4) is a p53-interacting oncoprotein that plays an important role in the p53 tumor suppressor pathway. The common rs4245739 A > C polymorphism creates a miR-191 binding site in the MDM4 gene transcript. Numerous studies have investigated the association between this MDM4 polymorphism and cancer risk, but have failed to reach a definitive conclusion. To address this issue, we conducted a meta-analysis by selecting eligible studies from MEDLINE, EMBASE, and Chinese Biomedical databases. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to assess the strength of the associations. We also performed genotype-based mRNA expression analysis using data from 270 individuals retrieved from public datasets. A total of 15 studies with 19796 cases and 49681 controls were included in the final meta-analysis. The pooled results revealed that the MDM4 rs4245739C allele is associated with a decreased cancer risk in the heterozygous (AC vs. AA: OR = 0.82, 95% CI = 0.73-0.93), dominant (AC/CC vs. AA: OR = 0.82, 95% CI = 0.72-0.93), and allele contrast models (C vs. A: OR = 0.84, 95% CI = 0.76-0.94). The association was more prominent in Asians and population-based studies. We also found that the rs4245739C allele was associated with decreased MDM4 mRNA expression, especially for Caucasians. Thus the MDM4 rs4245739 A > C polymorphism appears to be associated with decreased cancer risk. These findings would be strengthened by new studies with larger sample sizes and encompassing additional ethnicities.Entities:
Keywords: MDM4; cancer susceptibility; meta-analysis; polymorphism
Mesh:
Substances:
Year: 2016 PMID: 27687591 PMCID: PMC5342115 DOI: 10.18632/oncotarget.12326
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow diagram of included studies for the association between MDM4 rs4245739 A > C polymorphism and overall cancer risk
Characteristics of studies included in the current meta-analysis
| Surname | Year | Cancer type | Country | Ethnicity | Control source | Genotype method | Case | Control | MAF | HWE | Score | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AA | AC | CC | All | AA | AC | CC | All | ||||||||||
| Garcia-Closas | 2013 | Breast | Multi-center | Caucasian | Mixed | Illumina array | 3318 | 2637 | 557 | 6512 | 22825 | 15798 | 2828 | 41451 | 0.26 | 0.183 | 12 |
| Liu | 2013 | Breast | China | Asian | PB | PCR-RFLP | 733 | 67 | 0 | 800 | 686 | 111 | 3 | 800 | 0.07 | 0.505 | 13 |
| Liu | 2013 | Breast | China | Asian | PB | PCR-RFLP | 278 | 22 | 0 | 300 | 501 | 96 | 3 | 600 | 0.09 | 0.483 | 12 |
| Zhou | 2013 | ESCC | China | Asian | PB | PCR-RFLP | 501 | 37 | 2 | 540 | 478 | 70 | 2 | 550 | 0.07 | 0.740 | 13 |
| Zhou | 2013 | ESCC | China | Asian | PB | PCR-RFLP | 529 | 56 | 3 | 588 | 510 | 88 | 2 | 600 | 0.08 | 0.379 | 13 |
| Fan | 2014 | NHL | China | Asian | PB | PCR-RFLP | 187 | 13 | 0 | 200 | 346 | 53 | 1 | 400 | 0.07 | 0.487 | 12 |
| Feng | 2014 | Gastric | China | Asian | HB | PCR-RFLP | 208 | 209 | 51 | 468 | 210 | 219 | 64 | 493 | 0.35 | 0.561 | 10 |
| Gansmo | 2015 | Breast | Norway | Caucasian | PB | LightSNiP assay | 966 | 643 | 108 | 1717 | 1021 | 703 | 146 | 1870 | 0.27 | 0.106 | 12 |
| Gansmo | 2015 | Colon | Norway | Caucasian | PB | LightSNiP assay | 823 | 600 | 108 | 1531 | 2042 | 1439 | 266 | 3747 | 0.26 | 0.566 | 12 |
| Gansmo | 2015 | Lung | Norway | Caucasian | PB | LightSNiP assay | 715 | 515 | 101 | 1331 | 2042 | 1439 | 266 | 3747 | 0.26 | 0.566 | 12 |
| Gansmo | 2015 | Prostate | Norway | Caucasian | PB | LightSNiP assay | 1412 | 927 | 161 | 2500 | 1021 | 736 | 120 | 1877 | 0.26 | 0.410 | 12 |
| Gao | 2015 | Lung | China | Asian | PB | PCR-RFLP | 297 | 22 | 1 | 320 | 548 | 90 | 2 | 640 | 0.07 | 0.399 | 12 |
| Gao | 2015 | Lung | China | Asian | PB | PCR-RFLP | 183 | 17 | 0 | 200 | 321 | 77 | 2 | 400 | 0.10 | 0.248 | 12 |
| Gansmo | 2016 | Ovarian | Norway | Caucasian | HB | LightSNiP assay | 716 | 564 | 105 | 1385 | 1021 | 703 | 146 | 1870 | 0.27 | 0.106 | 12 |
| Gansmo | 2016 | Endometrial | Norway | Caucasian | HB | LightSNiP assay | 757 | 541 | 106 | 1404 | 1021 | 703 | 146 | 1870 | 0.27 | 0.106 | 12 |
MAF, minor allele frequency; HWE, Hardy-Weinberg equilibrium, ESCC, esophageal squamous cell carcinoma; NHL, non-Hodgkin lymphoma; PB, population based; HB, hospital based; PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism.
Figure 2Forest plot for the association between the MDM4 rs4245739 A > C polymorphism and cancer risk under the dominant model
The horizontal lines represent the ORs and 95% CIs of single studies. The diamond represents the pooled OR and 95% CI.
Meta-analysis of the association between MDM4 rs4245739 A > C polymorphism and cancer risk
| Variables | No. of studies | Sample size | Homozygous | Heterozygous | Recessive | Dominant | Allele | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC vs. AA | AC vs. AA | CC vs. AC+AA | AC+CC vs. AA | C vs. A | |||||||||||||
| OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||||||||||
| All a | 15 | 19796/49681 | 1.01 (0.87–1.17) | 0.005 | 54.9 | < 0.001 | 85.7 | 1.00 (0.89–1.14) | 0.041 | 42.6 | < 0.001 | 87.4 | < 0.001 | 87.9 | |||
| Cancer type | |||||||||||||||||
| Breast | 4 | 9329/44721 | 0.94 (0.55–1.61) | < 0.001 | 83.3 | 0.78 (0.57–1.06) | < 0.001 | 92.1 | 0.95 (0.59–1.51) | 0.002 | 79.3 | 0.76 (0.55–1.05) | < 0.001 | 93.7 | 0.77 (0.57–1.03) | < 0.001 | 94.3 |
| Lung | 3 | 1851/4787 | 1.08 (0.84–1.37) | 0.762 | 0.0 | 0.58 (0.29–1.19) | < 0.001 | 90.0 | 1.07 (0.84–1.35) | 0.814 | 0.0 | 0.59 (0.29–1.20) | < 0.001 | 90.5 | 0.61 (0.31–1.19) | < 0.001 | 90.0 |
| ESCC | 2 | 1128/1150 | 1.20 (0.32–4.50) | 0.759 | 0.0 | 0.484 | 0.0 | 1.27 (0.34–4.79) | 0.763 | 0.0 | 0.464 | 0.0 | 0.438 | 0.0 | |||
| Others | 6 | 7488/4640 | 0.98 (0.87–1.10) | 0.953 | 0.0 | 1.00 (0.89–1.11) | 0.036 | 58.1 | 0.97 (0.86–1.09) | 0.970 | 0.0 | 0.99 (0.89–1.10) | 0.041 | 56.9 | 0.99 (0.92–1.06) | 0.080 | 49.2 |
| Ethnicity | |||||||||||||||||
| Caucasians | 7 | 16380/45198 | 1.03 (0.88–1.22) | < 0.001 | 75.3 | 1.04 (0.97–1.12) | 0.012 | 63.1 | 1.02 (0.89–1.18) | 0.005 | 67.8 | 1.04 (0.95–1.13) | < 0.001 | 75.1 | 1.03 (0.95–1.11) | < 0.001 | 80.4 |
| Asians | 8 | 3416/4483 | 0.78 (0.54–1.14) | 0.908 | 0.0 | 0.007 | 64.0 | 0.81 (0.56–1.16) | 0.918 | 0.0 | 0.007 | 64.1 | 0.001 | 71.2 | |||
| Source of control | |||||||||||||||||
| PB | 11 | 10027/7737 | 0.96 (0.85–1.08) | 0.763 | 0.763 | < 0.001 | 83.4 | 0.96 (0.85–1.09) | 0.807 | 0.0 | < 0.001 | 84.0 | < 0.001 | 84.3 | |||
| HB | 3 | 3257/2363 | 0.97 (0.81–1.15) | 0.623 | 0.623 | 1.07 (0.97–1.18) | 0.461 | 0.0 | 0.94 (0.79–1.11) | 0.757 | 0.0 | 1.05 (0.96–1.16) | 0.387 | 0.0 | 1.02 (0.95–1.10) | 0.371 | 0.0 |
| Mixed | 1 | 6512/41451 | / | / | / | / | / | / | / | / | / | / | |||||
| Quality score | |||||||||||||||||
| ≥ 12 | 14 | 19596/49281 | 1.03 (0.88–1.19) | 0.009 | 53.9 | < 0.001 | 86.6 | 1.02 (0.90–1.16) | 0.055 | 41.0 | 0.81 (0.71–0.92) | < 0.001 | 88.2 | < 0.001 | 88.5 | ||
| < 12 | 1 | 200/400 | 0.81 (0.53–1.22) | / | / | 0.96 (0.74–1.26) | / | / | 0.82 (0.55–1.21) | / | / | 0.93 (0.72–1.20) | / | / | 0.92 (0.76–1.11) | / | / |
Het, heterogeneity; ESCC, esophageal squamous cell carcinoma; HB, hospital based; PB, population based.
MDM4 mRNA expression by the genotypes of rs4245739 A > C, using data from the HapMap
| Population | genotypes | No. | Mean ± SD | ||
|---|---|---|---|---|---|
| CEU | AA | 52 | 7.28 ± 0.31 | 0.001 | |
| AC | 29 | 7.06 ± 0.27 | 0.002 | ||
| CC | 9 | 6.96 ± 0.20 | 0.004 | ||
| Dominant | 38 | 7.03 ± 0.26 | 0.0002 | ||
| YRI | AA | 59 | 6.75 ± 0.23 | 0.724 | |
| AC | 25 | 6.72 ± 0.22 | 0.578 | ||
| CC | 6 | 6.68 ± 0.11 | 0.271 | ||
| Dominant | 31 | 6.71 ± 0.20 | 0.459 | ||
| Asian | AA | 80 | 6.86 ± 0.31 | 0.530 | |
| AC | 10 | 6.79 ± 0.23 | 0.530 | ||
| CC | 0 | / | / | ||
| Dominant | 10 | 6.79 ± 0.23 | 0.530 | ||
| All | AA | 191 | 6.94 ± 0.36 | 0.377 | |
| AC | 64 | 6.88 ± 0.29 | 0.271 | ||
| CC | 15 | 6.85 ± 0.22 | 0.165 | ||
| Dominant | 79 | 6.88 ± 0.28 | 0.135 |
CEU, 90 Utah residents with ancestry from northern and western Europe; YRI, 90 Yoruba in Ibadan, Nigeria.
Genotype data and mRNA expression levels for MDM4 by genotypes were obtained from the HapMap phase II release 23 data from EBV-transformed lymphoblastoid cell lines from 270 individuals.
Two-sided Student's t test within the stratum.
P values for the trend test of MDM4 mRNA expression among 3 genotypes for each SNP from a general linear model.
Figure 3mRNA expression level of the MDM4 gene in Epstein-Barr virus (EBV)-transformed lymphoblastoid cell lines
(A) mRNA expression in 90 cell lines from unrelated CEU (Utah residents with ancestry from northern and western Europe) individuals. (B) mRNA expression in 90 cell lines of unrelated YRI (Yoruba in Ibadan, Nigeria) individuals. (C) mRNA expression in 90 cell lines of unrelated Asian individuals. (D) mRNA expression in 270 cell lines of all individuals.