Literature DB >> 32556890

Association of KLK3, VAMP8 and MDM4 Genetic Variants within microRNA Binding Sites with Prostate Cancer: Evidence from Serbian Population.

Nevena Kotarac1, Zorana Dobrijevic1, Suzana Matijasevic1, Dusanka Savic-Pavicevic1, Goran Brajuskovic2.   

Abstract

A growing number of studies have suggested that genetic variants affecting the micro-RNA- binding mechanisms (miRSNPs) constitute a promising novel class of biomarkers for prostate cancer (PCa) biology. Among the most extensively studied miRSNPs in the context of cancer is the variation rs4245739 in the MDM4 gene, while a recent large-scale analysis revealed significant differences in genotype distributions between aggressive and non-aggressive disease for rs1058205 in KLK3 and rs1010 in VAMP8. In this study, we examined a total of 1083 subjects for these three variants using Taqman® SNP Genotyping Assays. Three hundred and fifty-five samples of peripheral blood were obtained from patients with PCa and 358 samples from patients with benign prostatic hyperplasia (BPH). The control group consisted of 370 healthy volunteers. Comparisons of genotype distributions among PCa and BPH patients, as well as between PCa patients and healthy controls, yielded no evidence of association between the analyzed genetic variants and the risk of developing PCa. However, all three tested genetic variants have shown the association with the parameters of PCa progression. For KLK3 variant rs1058205, minor allele C was found to associate with the lower serum PSA score in PCa patients (PSA > 20 ng/ml vs. PSA < 10 ng/ml comparison, Prec = 0.038; ORrec = 0.20, 95%CI 0.04-1.05). The obtained results point out the potential relevance of the tested genetic variants for the disease aggressiveness assessment.

Entities:  

Keywords:  Prostate cancer; miRSNPs; rs1010; rs1058205; rs4245739

Mesh:

Substances:

Year:  2020        PMID: 32556890     DOI: 10.1007/s12253-020-00839-7

Source DB:  PubMed          Journal:  Pathol Oncol Res        ISSN: 1219-4956            Impact factor:   3.201


  44 in total

1.  Assessment of association between genetic variants in microRNA genes hsa-miR-499, hsa-miR-196a2 and hsa-miR-27a and prostate cancer risk in Serbian population.

Authors:  Z Nikolić; D Savić Pavićević; N Vučić; S Cidilko; N Filipović; S Cerović; V Vukotić; S Romac; G Brajušković
Journal:  Exp Mol Pathol       Date:  2015-06-22       Impact factor: 3.362

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Journal:  Methods Mol Biol       Date:  2017

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4.  Genetic variation in IL-16 miRNA target site and time to prostate cancer diagnosis in African-American men.

Authors:  L Hughes; K Ruth; T R Rebbeck; V N Giri
Journal:  Prostate Cancer Prostatic Dis       Date:  2013-09-24       Impact factor: 5.554

5.  Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci.

Authors:  Fredrick R Schumacher; Ali Amin Al Olama; Sonja I Berndt; Sara Benlloch; Mahbubl Ahmed; Edward J Saunders; Tokhir Dadaev; Daniel Leongamornlert; Ezequiel Anokian; Clara Cieza-Borrella; Chee Goh; Mark N Brook; Xin Sheng; Laura Fachal; Joe Dennis; Jonathan Tyrer; Kenneth Muir; Artitaya Lophatananon; Victoria L Stevens; Susan M Gapstur; Brian D Carter; Catherine M Tangen; Phyllis J Goodman; Ian M Thompson; Jyotsna Batra; Suzanne Chambers; Leire Moya; Judith Clements; Lisa Horvath; Wayne Tilley; Gail P Risbridger; Henrik Gronberg; Markus Aly; Tobias Nordström; Paul Pharoah; Nora Pashayan; Johanna Schleutker; Teuvo L J Tammela; Csilla Sipeky; Anssi Auvinen; Demetrius Albanes; Stephanie Weinstein; Alicja Wolk; Niclas Håkansson; Catharine M L West; Alison M Dunning; Neil Burnet; Lorelei A Mucci; Edward Giovannucci; Gerald L Andriole; Olivier Cussenot; Géraldine Cancel-Tassin; Stella Koutros; Laura E Beane Freeman; Karina Dalsgaard Sorensen; Torben Falck Orntoft; Michael Borre; Lovise Maehle; Eli Marie Grindedal; David E Neal; Jenny L Donovan; Freddie C Hamdy; Richard M Martin; Ruth C Travis; Tim J Key; Robert J Hamilton; Neil E Fleshner; Antonio Finelli; Sue Ann Ingles; Mariana C Stern; Barry S Rosenstein; Sarah L Kerns; Harry Ostrer; Yong-Jie Lu; Hong-Wei Zhang; Ninghan Feng; Xueying Mao; Xin Guo; Guomin Wang; Zan Sun; Graham G Giles; Melissa C Southey; Robert J MacInnis; Liesel M FitzGerald; Adam S Kibel; Bettina F Drake; Ana Vega; Antonio Gómez-Caamaño; Robert Szulkin; Martin Eklund; Manolis Kogevinas; Javier Llorca; Gemma Castaño-Vinyals; Kathryn L Penney; Meir Stampfer; Jong Y Park; Thomas A Sellers; Hui-Yi Lin; Janet L Stanford; Cezary Cybulski; Dominika Wokolorczyk; Jan Lubinski; Elaine A Ostrander; Milan S Geybels; Børge G Nordestgaard; Sune F Nielsen; Maren Weischer; Rasmus Bisbjerg; Martin Andreas Røder; Peter Iversen; Hermann Brenner; Katarina Cuk; Bernd Holleczek; Christiane Maier; Manuel Luedeke; Thomas Schnoeller; Jeri Kim; Christopher J Logothetis; Esther M John; Manuel R Teixeira; Paula Paulo; Marta Cardoso; Susan L Neuhausen; Linda Steele; Yuan Chun Ding; Kim De Ruyck; Gert De Meerleer; Piet Ost; Azad Razack; Jasmine Lim; Soo-Hwang Teo; Daniel W Lin; Lisa F Newcomb; Davor Lessel; Marija Gamulin; Tomislav Kulis; Radka Kaneva; Nawaid Usmani; Sandeep Singhal; Chavdar Slavov; Vanio Mitev; Matthew Parliament; Frank Claessens; Steven Joniau; Thomas Van den Broeck; Samantha Larkin; Paul A Townsend; Claire Aukim-Hastie; Manuela Gago-Dominguez; Jose Esteban Castelao; Maria Elena Martinez; Monique J Roobol; Guido Jenster; Ron H N van Schaik; Florence Menegaux; Thérèse Truong; Yves Akoli Koudou; Jianfeng Xu; Kay-Tee Khaw; Lisa Cannon-Albright; Hardev Pandha; Agnieszka Michael; Stephen N Thibodeau; Shannon K McDonnell; Daniel J Schaid; Sara Lindstrom; Constance Turman; Jing Ma; David J Hunter; Elio Riboli; Afshan Siddiq; Federico Canzian; Laurence N Kolonel; Loic Le Marchand; Robert N Hoover; Mitchell J Machiela; Zuxi Cui; Peter Kraft; Christopher I Amos; David V Conti; Douglas F Easton; Fredrik Wiklund; Stephen J Chanock; Brian E Henderson; Zsofia Kote-Jarai; Christopher A Haiman; Rosalind A Eeles
Journal:  Nat Genet       Date:  2018-06-11       Impact factor: 38.330

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7.  regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors.

Authors:  Gary Wilk; Rosemary Braun
Journal:  PLoS Genet       Date:  2018-12-17       Impact factor: 5.917

Review 8.  Functional microRNA binding site variants.

Authors:  Ye Yuan; Joanne B Weidhaas
Journal:  Mol Oncol       Date:  2018-12-26       Impact factor: 6.603

9.  The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.

Authors:  Annalisa Buniello; Jacqueline A L MacArthur; Maria Cerezo; Laura W Harris; James Hayhurst; Cinzia Malangone; Aoife McMahon; Joannella Morales; Edward Mountjoy; Elliot Sollis; Daniel Suveges; Olga Vrousgou; Patricia L Whetzel; Ridwan Amode; Jose A Guillen; Harpreet S Riat; Stephen J Trevanion; Peggy Hall; Heather Junkins; Paul Flicek; Tony Burdett; Lucia A Hindorff; Fiona Cunningham; Helen Parkinson
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

10.  Analysis of association of potentially functional genetic variants within genes encoding miR-34b/c, miR-378 and miR-143/145 with prostate cancer in Serbian population.

Authors:  Nevena Kotarac; Zorana Dobrijevic; Suzana Matijasevic; Dusanka Savic-Pavicevic; Goran Brajuskovic
Journal:  EXCLI J       Date:  2019-07-16       Impact factor: 4.068

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  3 in total

1.  KLK3 SNP-SNP interactions for prediction of prostate cancer aggressiveness.

Authors:  Hui-Yi Lin; Po-Yu Huang; Chia-Ho Cheng; Heng-Yuan Tung; Zhide Fang; Anders E Berglund; Ann Chen; Jennifer French-Kwawu; Darian Harris; Julio Pow-Sang; Kosj Yamoah; John L Cleveland; Shivanshu Awasthi; Robert J Rounbehler; Travis Gerke; Jasreman Dhillon; Rosalind Eeles; Zsofia Kote-Jarai; Kenneth Muir; Johanna Schleutker; Nora Pashayan; David E Neal; Sune F Nielsen; Børge G Nordestgaard; Henrik Gronberg; Fredrik Wiklund; Graham G Giles; Christopher A Haiman; Ruth C Travis; Janet L Stanford; Adam S Kibel; Cezary Cybulski; Kay-Tee Khaw; Christiane Maier; Stephen N Thibodeau; Manuel R Teixeira; Lisa Cannon-Albright; Hermann Brenner; Radka Kaneva; Hardev Pandha; Srilakshmi Srinivasan; Judith Clements; Jyotsna Batra; Jong Y Park
Journal:  Sci Rep       Date:  2021-04-29       Impact factor: 4.379

2.  The Correlation of Mouse Double Minute 4 (MDM4) Polymorphisms (rs4245739, rs1563828, rs11801299, rs10900598, and rs1380576) with Cancer Susceptibility: A Meta-Analysis.

Authors:  Jian Chen; Xudong Li; Ruihao Liu; Yufen Xie; Zhigao Liu; Haiwei Xiong; Yingliang Li
Journal:  Med Sci Monit       Date:  2022-03-29

Review 3.  Role of Sex in the Therapeutic Targeting of p53 Circuitry.

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Journal:  Front Oncol       Date:  2021-07-08       Impact factor: 6.244

  3 in total

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