Literature DB >> 276855

Micrococcus luteus DNA gyrase: active components and a model for its supercoiling of DNA.

L F Liu, J C Wang.   

Abstract

Two active components alpha and beta of micrococcus luteus DNA gyrase, of peptide weights of 115,000 and 97,000, respectively, have been purified. Each individual component exhibits little DNA gyrase activity; the ATP-dependent negative supercoiling of a covalently closed circular DNA duplex is catalyzed by a combination of the two. Covalent closure by Escherichia coli ligase of a circular DNA containing single-chain scissions, when carried out in the presence of a combination of the DNA gyrase components alpha and beta, gives a positively supercoiled DNA upon removal of the bound protein molecules. ATP was not present during the ligase treatment; therefore the positive supercoiling of DNA observed is a result of the binding of gyrase molecules, presumably as multi-subunit oligomers, during the ligation step. This is in contrast to the negative supercoiling of DNA catalyzed by gyrase in the presence of ATP. A model in which negative supercoiling of DNA is achieved by ATP-modulated repetitive wrapping of the DNA around gyrase is described. The model also suggests a plausible mode of action by which translocation of a DNA along its helix axis can be actively driven by an ATPase.

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Year:  1978        PMID: 276855      PMCID: PMC392498          DOI: 10.1073/pnas.75.5.2098

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  DISC ELECTROPHORESIS. II. METHOD AND APPLICATION TO HUMAN SERUM PROTEINS.

Authors:  B J DAVIS
Journal:  Ann N Y Acad Sci       Date:  1964-12-28       Impact factor: 5.691

Review 2.  The mechanism of action of inhibitors of DNA synthesis.

Authors:  N R Cozzarelli
Journal:  Annu Rev Biochem       Date:  1977       Impact factor: 23.643

3.  Mechanism of action of nalidixic acid: purification of Escherichia coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme.

Authors:  A Sugino; C L Peebles; K N Kreuzer; N R Cozzarelli
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

4.  DNA gyrase: an enzyme that introduces superhelical turns into DNA.

Authors:  M Gellert; K Mizuuchi; M H O'Dea; H A Nash
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

5.  Structure of nucleosome core particles of chromatin.

Authors:  J T Finch; L C Lutter; D Rhodes; R S Brown; B Rushton; M Levitt; A Klug
Journal:  Nature       Date:  1977-09-01       Impact factor: 49.962

6.  Role of DNA gyrase in phiX replicative-form replication in vitro.

Authors:  K J Marians; J E Ikeda; S Schlagman; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1977-05       Impact factor: 11.205

7.  Purification and characterization of an omega protein from Micrococcus luteus.

Authors:  V T Kung; J C Wang
Journal:  J Biol Chem       Date:  1977-08-10       Impact factor: 5.157

8.  Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity.

Authors:  M Gellert; K Mizuuchi; M H O'Dea; T Itoh; J I Tomizawa
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

9.  Interaction between DNA and Escherichia coli protein omega. Formation of a complex between single-stranded DNA and omega protein.

Authors:  R E Depew; L F Liu; J C Wang
Journal:  J Biol Chem       Date:  1978-01-25       Impact factor: 5.157

10.  Physiochemical studies on interactions between DNA and RNA polymerase. Unwinding of the DNA helix by Escherichia coli RNA polymerase.

Authors:  J C Wang; J H Jacobsen; J M Saucier
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

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  73 in total

1.  The C-terminal domain of DNA gyrase A adopts a DNA-bending beta-pinwheel fold.

Authors:  Kevin D Corbett; Ryan K Shultzaberger; James M Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

2.  Computational analysis of DNA gyrase action.

Authors:  Alexander Vologodskii
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

3.  Crystal structures of Escherichia coli topoisomerase IV ParE subunit (24 and 43 kilodaltons): a single residue dictates differences in novobiocin potency against topoisomerase IV and DNA gyrase.

Authors:  Steven Bellon; Jonathan D Parsons; Yunyi Wei; Koto Hayakawa; Lora L Swenson; Paul S Charifson; Judith A Lippke; Robert Aldape; Christian H Gross
Journal:  Antimicrob Agents Chemother       Date:  2004-05       Impact factor: 5.191

4.  Potassium ions are required for nucleotide-induced closure of gyrase N-gate.

Authors:  Airat Gubaev; Dagmar Klostermeier
Journal:  J Biol Chem       Date:  2012-02-16       Impact factor: 5.157

5.  DNA supercoiling by Xenopus laevis oocyte extracts: requirement for a nuclear factor.

Authors:  M I Baldi; E Mattoccia; G P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

6.  A naturally chimeric type IIA topoisomerase in Aquifex aeolicus highlights an evolutionary path for the emergence of functional paralogs.

Authors:  Elsa M Tretter; Jeffrey C Lerman; James M Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-12       Impact factor: 11.205

7.  Winding of the DNA helix by divalent metal ions.

Authors:  Y C Xu; H Bremer
Journal:  Nucleic Acids Res       Date:  1997-10-15       Impact factor: 16.971

8.  Mechanochemical analysis of DNA gyrase using rotor bead tracking.

Authors:  Jeff Gore; Zev Bryant; Michael D Stone; Marcelo Nöllmann; Nicholas R Cozzarelli; Carlos Bustamante
Journal:  Nature       Date:  2006-01-05       Impact factor: 49.962

9.  The C-terminal domain of the Escherichia coli DNA gyrase A subunit is a DNA-binding protein.

Authors:  R J Reece; A Maxwell
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

10.  DNA gyrase: purification and catalytic properties of a fragment of gyrase B protein.

Authors:  M Gellert; L M Fisher; M H O'Dea
Journal:  Proc Natl Acad Sci U S A       Date:  1979-12       Impact factor: 11.205

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