Literature DB >> 27685457

Colorimetric Detection of Bacteria Using Litmus Test.

Kha Tram1, Sepehr Manochehry1, Qian Feng2, Dingran Chang1, Bruno J Salena3, Yingfu Li4.   

Abstract

There are increasing demands for simple but still effective methods that can be used to detect specific pathogens for point-of-care or field applications. Such methods need to be user-friendly and produce reliable results that can be easily interpreted by both specialists and non-professionals. The litmus test for pH is simple, quick, and effective as it reports the pH of a test sample via a simple color change. We have developed an approach to take advantage of the litmus test for bacterial detection. The method exploits a bacterium-specific RNA-cleaving DNAzyme to achieve two functions: recognizing a bacterium of interest and providing a mechanism to control the activity of urease. Through the use of magnetic beads immobilized with a DNAzyme-urease conjugate, the presence of bacteria in a test sample is relayed to the release of urease from beads to solution. The released urease is transferred to a test solution to hydrolyze urea into ammonia, resulting in an increase of pH that can be visualized using the classic litmus test.

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Year:  2016        PMID: 27685457      PMCID: PMC5092029          DOI: 10.3791/54546

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  27 in total

1.  A sensitive microsphere coagulation ELISA for Escherichia coli O157:H7 using Russell's viper venom.

Authors:  N J Strachan; I D Ogden
Journal:  FEMS Microbiol Lett       Date:  2000-05-01       Impact factor: 2.742

2.  Top ten biotechnologies for improving health in developing countries.

Authors:  Abdallah S Daar; Halla Thorsteinsdóttir; Douglas K Martin; Alyna C Smith; Shauna Nast; Peter A Singer
Journal:  Nat Genet       Date:  2002-10       Impact factor: 38.330

3.  Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.

Authors:  C Tuerk; L Gold
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

Review 4.  A review of conventional detection and enumeration methods for pathogenic bacteria in food.

Authors:  Kiev S Gracias; John L McKillip
Journal:  Can J Microbiol       Date:  2004-11       Impact factor: 2.419

Review 5.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

Review 6.  Biologically inspired synthetic enzymes made from DNA.

Authors:  Kenny Schlosser; Yingfu Li
Journal:  Chem Biol       Date:  2009-03-27

7.  Fluorogenic DNAzyme probes as bacterial indicators.

Authors:  M Monsur Ali; Sergio D Aguirre; Hadeer Lazim; Yingfu Li
Journal:  Angew Chem Int Ed Engl       Date:  2011-03-15       Impact factor: 15.336

8.  Translating bacterial detection by DNAzymes into a litmus test.

Authors:  Kha Tram; Pushpinder Kanda; Bruno J Salena; Shuangyan Huan; Yingfu Li
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-11       Impact factor: 15.336

9.  Using personal glucose meters and functional DNA sensors to quantify a variety of analytical targets.

Authors:  Yu Xiang; Yi Lu
Journal:  Nat Chem       Date:  2011-07-24       Impact factor: 24.427

10.  In vitro selection of a new lanthanide-dependent DNAzyme for ratiometric sensing lanthanides.

Authors:  Po-Jung Jimmy Huang; Mahsa Vazin; Juewen Liu
Journal:  Anal Chem       Date:  2014-09-22       Impact factor: 6.986

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  2 in total

Review 1.  RNA-cleaving DNAzymes as a diagnostic and therapeutic agent against antimicrobial resistant bacteria.

Authors:  Bao Chi Wong; Juwaini Abu Bakar; Amreeta Dhanoa; Hock Siew Tan
Journal:  Curr Genet       Date:  2021-09-09       Impact factor: 3.886

Review 2.  Integrating Deoxyribozymes into Colorimetric Sensing Platforms.

Authors:  Dingran Chang; Sandy Zakaria; Mimi Deng; Nicholas Allen; Kha Tram; Yingfu Li
Journal:  Sensors (Basel)       Date:  2016-12-03       Impact factor: 3.576

  2 in total

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