Literature DB >> 34505182

RNA-cleaving DNAzymes as a diagnostic and therapeutic agent against antimicrobial resistant bacteria.

Bao Chi Wong1, Juwaini Abu Bakar1, Amreeta Dhanoa2, Hock Siew Tan3,4.   

Abstract

The development of nucleic-acid-based antimicrobials such as RNA-cleaving DNAzyme (RCD), a short catalytically active nucleic acid, is a promising alternative to the current antibiotics. The current rapid spread of antimicrobial resistance (AMR) in bacteria renders some antibiotics useless against bacterial infection, thus creating the need for alternative antimicrobials such as DNAzymes. This review summarizes recent advances in the use of RCD as a diagnostic and therapeutic agent against AMR. Firstly, the recent diagnostic application of RCD for the detection of bacterial cells and the associated resistant gene(s) is discussed. The next section summarises the therapeutic application of RCD in AMR bacterial infections which includes direct targeting of the resistant genes and indirect targeting of AMR-associated genes. Finally, this review extends the discussion to challenges of utilizing RCD in real-life applications, and the potential of combining both diagnostic and therapeutic applications of RCD into a single agent as a theranostic agent.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Antimicrobial resistance; DNAzymes; Diagnostic agents; Therapeutic agents

Mesh:

Substances:

Year:  2021        PMID: 34505182     DOI: 10.1007/s00294-021-01212-0

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  74 in total

1.  DNA-only cascade: a universal tool for signal amplification, enhancing the detection of target analytes.

Authors:  Simon M Bone; Nicole J Hasick; Nicole E Lima; Simon M Erskine; Elisa Mokany; Alison V Todd
Journal:  Anal Chem       Date:  2014-08-26       Impact factor: 6.986

2.  Fluorogenic DNAzyme probes as bacterial indicators.

Authors:  M Monsur Ali; Sergio D Aguirre; Hadeer Lazim; Yingfu Li
Journal:  Angew Chem Int Ed Engl       Date:  2011-03-15       Impact factor: 15.336

3.  Multiplex detection of extensively drug resistant tuberculosis using binary deoxyribozyme sensors.

Authors:  Hillary N Bengtson; Susanne Homolka; Stefan Niemann; Ana Júlia Reis; Pedro Eduardo da Silva; Yulia V Gerasimova; Dmitry M Kolpashchikov; Kyle H Rohde
Journal:  Biosens Bioelectron       Date:  2017-03-01       Impact factor: 10.618

4.  A DNA enzyme that cleaves RNA.

Authors:  R R Breaker; G F Joyce
Journal:  Chem Biol       Date:  1994-12

5.  A Simple DNAzyme-Based Fluorescent Assay for Klebsiella pneumoniae.

Authors:  M Monsur Ali; Anatoly Slepenkin; Ellena Peterson; Weian Zhao
Journal:  Chembiochem       Date:  2019-02-11       Impact factor: 3.164

Review 6.  Assembly of cell division proteins at the E. coli cell center.

Authors:  Nienke Buddelmeijer; Jon Beckwith
Journal:  Curr Opin Microbiol       Date:  2002-12       Impact factor: 7.934

7.  DNAzyme-mediated inhibition of Japanese encephalitis virus replication in mouse brain.

Authors:  Mohan Babu Appaiahgari; Sudhanshu Vrati
Journal:  Mol Ther       Date:  2007-06-19       Impact factor: 11.454

8.  Optimisation of the 10-23 DNAzyme-substrate pairing interactions enhanced RNA cleavage activity at purine-cytosine target sites.

Authors:  Murray J Cairns; Andrew King; Lun-Quan Sun
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

9.  A lead-dependent DNAzyme with a two-step mechanism.

Authors:  Andrea K Brown; Jing Li; Caroline M-B Pavot; Yi Lu
Journal:  Biochemistry       Date:  2003-06-17       Impact factor: 3.162

10.  A sensitive DNA enzyme-based fluorescent assay for bacterial detection.

Authors:  Sergio D Aguirre; M Monsur Ali; Bruno J Salena; Yingfu Li
Journal:  Biomolecules       Date:  2013-08-20
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