Literature DB >> 27676239

Structural insight into the necessary conformational changes of modular nonribosomal peptide synthetases.

Andrew M Gulick1.   

Abstract

Nonribosomal peptide synthetases (NRPSs) catalyze the assembly line biosynthesis of peptide natural products that play important roles in microbial signaling and communication. These multidomain enzymes use an integrated carrier protein that delivers the growing peptide to the catalytic domains, requiring coordinated conformational changes that allow the proper sequence of synthetic steps. Recent structural studies of NRPSs have described important conformational states and illustrate the critical role of a small subdomain within the adenylation domains. This subdomain alternates between catalytic conformations and also serves as a linker domain, providing further conformational flexibility to enable the carrier to project from the core of NRPS. These studies are described along with remaining questions in the study of the structural dynamics of NRPSs.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27676239      PMCID: PMC5161630          DOI: 10.1016/j.cbpa.2016.09.005

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  48 in total

1.  Modular Peptide Synthetases Involved in Nonribosomal Peptide Synthesis.

Authors:  Mohamed A. Marahiel; Torsten Stachelhaus; Henning D. Mootz
Journal:  Chem Rev       Date:  1997-11-10       Impact factor: 60.622

Review 2.  Structural insights into nonribosomal peptide enzymatic assembly lines.

Authors:  Alexander Koglin; Christopher T Walsh
Journal:  Nat Prod Rep       Date:  2009-05-22       Impact factor: 13.423

Review 3.  Nonribosomal peptide synthetases: structures and dynamics.

Authors:  Matthias Strieker; Alan Tanović; Mohamed A Marahiel
Journal:  Curr Opin Struct Biol       Date:  2010-02-10       Impact factor: 6.809

Review 4.  The structural role of the carrier protein--active controller or passive carrier.

Authors:  John Crosby; Matthew P Crump
Journal:  Nat Prod Rep       Date:  2012-08-24       Impact factor: 13.423

5.  Structures of a Nonribosomal Peptide Synthetase Module Bound to MbtH-like Proteins Support a Highly Dynamic Domain Architecture.

Authors:  Bradley R Miller; Eric J Drake; Ce Shi; Courtney C Aldrich; Andrew M Gulick
Journal:  J Biol Chem       Date:  2016-09-05       Impact factor: 5.157

6.  The structure of a transient complex of a nonribosomal peptide synthetase and a cytochrome P450 monooxygenase.

Authors:  Kristina Haslinger; Clara Brieke; Stefanie Uhlmann; Lina Sieverling; Roderich D Süssmuth; Max J Cryle
Journal:  Angew Chem Int Ed Engl       Date:  2014-07-09       Impact factor: 15.336

7.  Structure of PA1221, a nonribosomal peptide synthetase containing adenylation and peptidyl carrier protein domains.

Authors:  Carter A Mitchell; Ce Shi; Courtney C Aldrich; Andrew M Gulick
Journal:  Biochemistry       Date:  2012-04-03       Impact factor: 3.162

8.  Heterologous expression and structural characterisation of a pyrazinone natural product assembly line.

Authors:  Morgan A Wyatt; M C Y Mok; Murray Junop; Nathan A Magarvey
Journal:  Chembiochem       Date:  2012-10-15       Impact factor: 3.164

9.  Interdomain and Intermodule Organization in Epimerization Domain Containing Nonribosomal Peptide Synthetases.

Authors:  Wei-Hung Chen; Kunhua Li; Naga Sandhya Guntaka; Steven D Bruner
Journal:  ACS Chem Biol       Date:  2016-06-24       Impact factor: 5.100

10.  Analysis of the linker region joining the adenylation and carrier protein domains of the modular nonribosomal peptide synthetases.

Authors:  Bradley R Miller; Jesse A Sundlov; Eric J Drake; Thomas A Makin; Andrew M Gulick
Journal:  Proteins       Date:  2014-07-05
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  11 in total

1.  Mechanism of Integrated β-Lactam Formation by a Nonribosomal Peptide Synthetase during Antibiotic Synthesis.

Authors:  Darcie H Long; Craig A Townsend
Journal:  Biochemistry       Date:  2018-05-03       Impact factor: 3.162

2.  Crystal Structure of the Siderophore Binding Protein BauB Bound to an Unusual 2:1 Complex Between Acinetobactin and Ferric Iron.

Authors:  Daniel C Bailey; Tabbetha J Bohac; Justin A Shapiro; Daryl E Giblin; Timothy A Wencewicz; Andrew M Gulick
Journal:  Biochemistry       Date:  2018-11-15       Impact factor: 3.162

Review 3.  Biosynthesis of depsipeptides, or Depsi: The peptides with varied generations.

Authors:  Diego A Alonzo; T Martin Schmeing
Journal:  Protein Sci       Date:  2020-11-02       Impact factor: 6.725

4.  Synthetic biology, genome mining, and combinatorial biosynthesis of NRPS-derived antibiotics: a perspective.

Authors:  Richard H Baltz
Journal:  J Ind Microbiol Biotechnol       Date:  2017-12-29       Impact factor: 3.346

Review 5.  Type II non-ribosomal peptide synthetase proteins: structure, mechanism, and protein-protein interactions.

Authors:  Matt J Jaremko; Tony D Davis; Joshua C Corpuz; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2020-03-25       Impact factor: 13.423

Review 6.  Nonribosomal peptide synthetase biosynthetic clusters of ESKAPE pathogens.

Authors:  Andrew M Gulick
Journal:  Nat Prod Rep       Date:  2017-08-02       Impact factor: 13.423

Review 7.  Marine Cyclic Peptides: Antimicrobial Activity and Synthetic Strategies.

Authors:  Ricardo Ribeiro; Eugénia Pinto; Carla Fernandes; Emília Sousa
Journal:  Mar Drugs       Date:  2022-06-15       Impact factor: 6.085

8.  Structures of carboxylic acid reductase reveal domain dynamics underlying catalysis.

Authors:  Deepankar Gahloth; Mark S Dunstan; Daniela Quaglia; Evaldas Klumbys; Michael P Lockhart-Cairns; Andrew M Hill; Sasha R Derrington; Nigel S Scrutton; Nicholas J Turner; David Leys
Journal:  Nat Chem Biol       Date:  2017-07-17       Impact factor: 15.040

9.  Structure of a bound peptide phosphonate reveals the mechanism of nocardicin bifunctional thioesterase epimerase-hydrolase half-reactions.

Authors:  Ketan D Patel; Felipe B d'Andrea; Nicole M Gaudelli; Andrew R Buller; Craig A Townsend; Andrew M Gulick
Journal:  Nat Commun       Date:  2019-08-27       Impact factor: 14.919

10.  Development of a High-Throughput Biochemical Assay to Screen for Inhibitors of Aerobactin Synthetase IucA.

Authors:  Daniel C Bailey; Brian P Buckley; Mikhail V Chernov; Andrew M Gulick
Journal:  SLAS Discov       Date:  2018-07-10       Impact factor: 3.341

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