| Literature DB >> 27663200 |
Zhihua Yin1,2, Zhigang Cui3, Hang Li1,2, Yangwu Ren1,2, Biyun Qian4, Nathaniel Rothman5, Qing Lan5, Baosen Zhou6,7.
Abstract
BACKGROUND: The associations between microRNAs and lung cancer have received increasing attention. This study assess the association between polymorphisms in miR-135a-2, miR-219-2 and miR-211 genes and the risk of lung cancer, as well as the gene-environment interaction between these polymorphisms and cooking oil fume exposure.Entities:
Year: 2016 PMID: 27663200 PMCID: PMC5035461 DOI: 10.1186/s12885-016-2784-1
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Allele and genotype frequencies of miRNA polymorphisms among cases and controls as well as their effects on lung cancer and adenocarcinoma risk in non-smoking females
| SNP | No of controls (%) | Lung cancer | Lung adenocarcinoma | ||||
|---|---|---|---|---|---|---|---|
| No (%) | OR [95 % CI] |
| No (%) | OR [95 % CI] |
| ||
| miR-135a-2 rs10459194 | |||||||
| TT | 219 (82.3) | 210 (78.4) | 1.00 (ref) | 151 (76.6) | 1.00 (ref) | ||
| TC | 46 (17.3) | 56 (20.9) | 1.270 (0.823–1.959) | 0.281 | 45 (22.8) | 1.419 (0.895–2.248) | 0.136 |
| CC | 1 (0.4) | 2 (0.7) | 2.086 (0.188–23.174) | 0.550 | 1 (0.5) | 1.450 (0.895–2.248) | 0.793 |
| TC + CC vs TT | 1.287 (0.838–1.976) | 0.249 | 1.419 (0.899–2.240) | 0.132 | |||
| CC vs TT + TC | 1.992 (0.180–22.106) | 0.574 | 1.352 (0.084–21.749) | 0.831 | |||
| T allele | 484 (91.0) | 476 (88.9) | 1.00 (ref) | 347 (88.1) | 1.00 (ref) | ||
| C allele | 48 (9.0) | 60 (11.2) | 1.271 (0.852–1.896) | 0.239 | 47 (11.9) | 1.366 (0.893–2.089) | 0.150 |
| miR-219-2 rs10988341 | |||||||
| AA | 195 (73.3) | 186 (69.4) | 1.00 (ref) | 136 (69.0) | 1.00 (ref) | ||
| AG | 62 (23.3) | 73 (27.2) | 1.234 (0.833–1.830) | 0.294 | 52 (26.4) | 1.203 (0.783–1.846) | 0.399 |
| GG | 9 (3.4) | 9 (3.4) | 1.048 (0.407–2.699) | 0.922 | 9 (4.6) | 1.434 (0.555–3.706) | 0.457 |
| AG + GG vs AA | 1.211 (0.831–1.763) | 0.319 | 1.232 (0.821–1.849) | 0.314 | |||
| GG vs AA + AG | 0.992 (0.388–2.540) | 0.987 | 1.367 (0.532–3.510) | 0.516 | |||
| A allele | 452 (85.0) | 445 (83.0) | 1.00 (ref) | 324 (82.2) | 1.00 (ref) | ||
| G allele | 80 (15.0) | 91 (17.0) | 1.155 (0.833–1.603) | 0.387 | 70 (17.8) | 1.221 (0.859–1.734) | 0.265 |
| miR-211 rs1514035 | |||||||
| AA | 213 (80.1) | 219 (81.7) | 1.00 (ref) | 165 (83.8) | 1.00 (ref) | ||
| AG | 48 (18.0) | 43 (16.0) | 0.871 (0.554–1.370) | 0.551 | 28 (14.2) | 0.753 (0.453–1.252) | 0.274 |
| GG | 5 (1.9) | 6 (2.2) | 1.167 (0.351–3.882) | 0.801 | 4 (2.0) | 1.033 (0.273–3.906) | 0.962 |
| AG + GG vs AA | 0.899 (0.584–1.385) | 0.630 | 0.779 (0.481–1.264) | 0.312 | |||
| GG vs AA + AG | 1.195 (0.360–3.965) | 0.770 | 1.082 (0.287–4.082) | 0.908 | |||
| A allele | 474 (89.1) | 481 (89.7) | 1.00 (ref) | 358 (90.9) | 1.00 (ref) | ||
| G allele | 58 (10.9) | 55 (10.3) | 0.934 (0.633–1.380) | 0.733 | 36 (9.1) | 0.822 (0.530–1.273) | 0.379 |
Abbreviation: SNP single nucleotide polymorphism, OR odds ratio, CI confidence interval
Interaction between SNPs in miRNAs and cooking oil exposure on lung cancer susceptibility in Chinese non-smoking female population
| SNP | Oil | No of controls (%) | No of cases (%) | OR (95 % CI) |
|
|---|---|---|---|---|---|
| rs10459194 | |||||
| TT | Non-exposure | 166 (62.4) | 133 (49.6) | 1.00 (ref) | — |
| TC + CC | Non-exposure | 34 (12.8) | 35 (13.1) | 1.285 (0.761–2.170) | 0.349 |
| TT | Exposure | 53 (19.9) | 77 (28.7) | 1.813 (1.194–2.753) | 0.005 |
| TC + CC | Exposure | 13 (4.9) | 23 (8.6) | 2.208 (1.078–4.524) | 0.030 |
| rs10988341 | |||||
| AA | Non-exposure | 147 (55.3) | 117 (43.7) | 1.00 (ref) | — |
| AG + GG | Non-exposure | 53 (19.9) | 51 (19.0) | 1.209 (0.767–1.905) | 0.413 |
| AA | Exposure | 48 (18.0) | 69 (25.7) | 1.806 (1.162–2.808) | 0.009 |
| AG + GG | Exposure | 18 (6.8) | 31 (11.6) | 2.164 (1.153–4.061) | 0.016 |
| rs1514035 | |||||
| AG + GG | Non-exposure | 36 (13.5) | 27 (10.1) | 1.00 (ref) | — |
| AA | Non-exposure | 164 (61.7) | 141 (52.6) | 1.146 (0.663–1.982) | 0.625 |
| AG + GG | Exposure | 17 (6.4) | 22 (8.2) | 1.725 (0.771–3.963) | 0.185 |
| AA | Exposure | 49 (18.4) | 78 (29.1) | 2.122 (1.149–3.921) | 0.016 |
Interaction between SNPs in miRNAs and cooking oil exposure on lung adenocarcinoma in Chinese non-smoking female population
| SNP | Oil | No of controls (%) | No of cases (%) | OR (95 % CI) |
|
|---|---|---|---|---|---|
| rs10459194 | |||||
| TT | Non-exposure | 166 (62.4) | 100 (50.8) | 1.00 (ref) | — |
| TC + CC | Non-exposure | 34 (12.8) | 26 (13.2) | 1.269 (0.720–2.240) | 0.410 |
| TT | Exposure | 53 (19.9) | 51 (25.9) | 1.597 (1.011–2.524) | 0.045 |
| TC + CC | Exposure | 13 (4.9) | 20 (10.2) | 2.554 (1.217–5.358) | 0.013 |
| rs10988341 | |||||
| AA | Non-exposure | 147 (55.3) | 87 (44.2) | 1.00 (ref) | — |
| AG + GG | Non-exposure | 53 (19.9) | 39 (19.8) | 1.243 (0.761–2.032) | 0.385 |
| AA | Exposure | 48 (18.0) | 49 (24.9) | 1.725 (1.069–2.783) | 0.025 |
| AG + GG | Exposure | 18 (6.8) | 22 (11.2) | 2.065 (1.049–4.064) | 0.036 |
| rs1514035 | |||||
| AG + GG | Non-exposure | 36 (13.5) | 20 (10.2) | 1.00 (ref) | — |
| AA | Non-exposure | 164 (61.7) | 106 (53.8) | 1.163 (0.639–2.117) | 0.620 |
| AG + GG | Exposure | 17 (6.4) | 12 (6.1) | 1.271 (0.507–3.186) | 0.610 |
| AA | Exposure | 49 (18.4) | 59 (29.9) | 2.167 (1.115–4.215) | 0.023 |
Interaction measures between SNPs in miRNAs and cooking oil exposure on lung cancer and adenocarcinoma in Chinese non-smoking female population
| SNP | Lung cancer | Lung adenocarcinoma | ||||
|---|---|---|---|---|---|---|
| Measure | Estimate | 95 % CI | Measure | Estimate | 95 % CI | |
| rs10459194 | ||||||
| RERI | 0.110 | −1.641, 1.861 | RERI | 0.687 | −1.309, 2.683 | |
| AP | 0.050 | −0.716, 0.815 | AP | 0.269 | −0.357, 0.895 | |
| S | 1.100 | 0.247, 4.906 | S | 1.793 | 0.363, 8.848 | |
| rs10988341 | ||||||
| RERI | 0.149 | −1.362, 1.659 | RERI | 0.097 | −1.468, 1.662 | |
| AP | 0.069 | −0.599, 0.736 | AP | 0.047 | −0.689, 0.783 | |
| S | 1.147 | 0.291, 4.154 | S | 1.100 | 0.239, 5.067 | |
| rs1514035 | ||||||
| RERI | 0.251 | −1.154, 1.656 | RERI | 0.733 | −0.554, 2.021 | |
| AP | 0.118 | −0.541, 0.777 | AP | 0.338 | −0.237, 0.914 | |
| S | 1.287 | 0.256, 6.463 | S | 2.690 | 0.117, 61.648 | |
RERI relative excess risk due to interaction, AP attributable proportion due to interaction, S synergy index, 95 % CI 95 % confidence interval