Literature DB >> 23143601

Genome-wide association analysis identifies new lung cancer susceptibility loci in never-smoking women in Asia.

Qing Lan1, Chao A Hsiung, Keitaro Matsuo, Yun-Chul Hong, Adeline Seow, Zhaoming Wang, H Dean Hosgood, Kexin Chen, Jiu-Cun Wang, Nilanjan Chatterjee, Wei Hu, Maria Pik Wong, Wei Zheng, Neil Caporaso, Jae Yong Park, Chien-Jen Chen, Yeul Hong Kim, Young Tae Kim, Maria Teresa Landi, Hongbing Shen, Charles Lawrence, Laurie Burdett, Meredith Yeager, Jeffrey Yuenger, Kevin B Jacobs, I-Shou Chang, Tetsuya Mitsudomi, Hee Nam Kim, Gee-Chen Chang, Bryan A Bassig, Margaret Tucker, Fusheng Wei, Zhihua Yin, Chen Wu, She-Juan An, Biyun Qian, Victor Ho Fun Lee, Daru Lu, Jianjun Liu, Hyo-Sung Jeon, Chin-Fu Hsiao, Jae Sook Sung, Jin Hee Kim, Yu-Tang Gao, Ying-Huang Tsai, Yoo Jin Jung, Huan Guo, Zhibin Hu, Amy Hutchinson, Wen-Chang Wang, Robert Klein, Charles C Chung, In-Jae Oh, Kuan-Yu Chen, Sonja I Berndt, Xingzhou He, Wei Wu, Jiang Chang, Xu-Chao Zhang, Ming-Shyan Huang, Hong Zheng, Junwen Wang, Xueying Zhao, Yuqing Li, Jin Eun Choi, Wu-Chou Su, Kyong Hwa Park, Sook Whan Sung, Xiao-Ou Shu, Yuh-Min Chen, Li Liu, Chang Hyun Kang, Lingmin Hu, Chung-Hsing Chen, William Pao, Young-Chul Kim, Tsung-Ying Yang, Jun Xu, Peng Guan, Wen Tan, Jian Su, Chih-Liang Wang, Haixin Li, Alan Dart Loon Sihoe, Zhenhong Zhao, Ying Chen, Yi Young Choi, Jen-Yu Hung, Jun Suk Kim, Ho-Il Yoon, Qiuyin Cai, Chien-Chung Lin, In Kyu Park, Ping Xu, Jing Dong, Christopher Kim, Qincheng He, Reury-Perng Perng, Takashi Kohno, Sun-Seog Kweon, Chih-Yi Chen, Roel Vermeulen, Junjie Wu, Wei-Yen Lim, Kun-Chieh Chen, Wong-Ho Chow, Bu-Tian Ji, John K C Chan, Minjie Chu, Yao-Jen Li, Jun Yokota, Jihua Li, Hongyan Chen, Yong-Bing Xiang, Chong-Jen Yu, Hideo Kunitoh, Guoping Wu, Li Jin, Yen-Li Lo, Kouya Shiraishi, Ying-Hsiang Chen, Hsien-Chih Lin, Tangchun Wu, Yi-Long Wu, Pan-Chyr Yang, Baosen Zhou, Min-Ho Shin, Joseph F Fraumeni, Dongxin Lin, Stephen J Chanock, Nathaniel Rothman.   

Abstract

To identify common genetic variants that contribute to lung cancer susceptibility, we conducted a multistage genome-wide association study of lung cancer in Asian women who never smoked. We scanned 5,510 never-smoking female lung cancer cases and 4,544 controls drawn from 14 studies from mainland China, South Korea, Japan, Singapore, Taiwan and Hong Kong. We genotyped the most promising variants (associated at P < 5 × 10(-6)) in an additional 1,099 cases and 2,913 controls. We identified three new susceptibility loci at 10q25.2 (rs7086803, P = 3.54 × 10(-18)), 6q22.2 (rs9387478, P = 4.14 × 10(-10)) and 6p21.32 (rs2395185, P = 9.51 × 10(-9)). We also confirmed associations reported for loci at 5p15.33 and 3q28 and a recently reported finding at 17q24.3. We observed no evidence of association for lung cancer at 15q25 in never-smoking women in Asia, providing strong evidence that this locus is not associated with lung cancer independent of smoking.

Entities:  

Mesh:

Year:  2012        PMID: 23143601      PMCID: PMC4169232          DOI: 10.1038/ng.2456

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  54 in total

1.  Risk factors for primary lung cancer among never smokers by gender in a matched case-control study.

Authors:  Yen-Li Lo; Chin-Fu Hsiao; Gee-Chen Chang; Ying-Huang Tsai; Ming-Shyan Huang; Wu-Chou Su; Yuh-Min Chen; Che-Wei Hsin; Chin-Hao Chang; Pan-Chyr Yang; Chien-Jen Chen; Chao A Hsiung
Journal:  Cancer Causes Control       Date:  2012-05-22       Impact factor: 2.506

2.  Genetic variants on chromosome 15q25 associated with lung cancer risk in Chinese populations.

Authors:  Chen Wu; Zhibin Hu; Dianke Yu; Liming Huang; Guangfu Jin; Jie Liang; Huan Guo; Wen Tan; Mingfeng Zhang; Ji Qian; Daru Lu; Tangchun Wu; Dongxin Lin; Hongbing Shen
Journal:  Cancer Res       Date:  2009-06-02       Impact factor: 12.701

3.  Practical aspects of imputation-driven meta-analysis of genome-wide association studies.

Authors:  Paul I W de Bakker; Manuel A R Ferreira; Xiaoming Jia; Benjamin M Neale; Soumya Raychaudhuri; Benjamin F Voight
Journal:  Hum Mol Genet       Date:  2008-10-15       Impact factor: 6.150

4.  Genome-wide association study identifies variants in the ABO locus associated with susceptibility to pancreatic cancer.

Authors:  Laufey Amundadottir; Peter Kraft; Rachael Z Stolzenberg-Solomon; Charles S Fuchs; Gloria M Petersen; Alan A Arslan; H Bas Bueno-de-Mesquita; Myron Gross; Kathy Helzlsouer; Eric J Jacobs; Andrea LaCroix; Wei Zheng; Demetrius Albanes; William Bamlet; Christine D Berg; Franco Berrino; Sheila Bingham; Julie E Buring; Paige M Bracci; Federico Canzian; Françoise Clavel-Chapelon; Sandra Clipp; Michelle Cotterchio; Mariza de Andrade; Eric J Duell; John W Fox; Steven Gallinger; J Michael Gaziano; Edward L Giovannucci; Michael Goggins; Carlos A González; Göran Hallmans; Susan E Hankinson; Manal Hassan; Elizabeth A Holly; David J Hunter; Amy Hutchinson; Rebecca Jackson; Kevin B Jacobs; Mazda Jenab; Rudolf Kaaks; Alison P Klein; Charles Kooperberg; Robert C Kurtz; Donghui Li; Shannon M Lynch; Margaret Mandelson; Robert R McWilliams; Julie B Mendelsohn; Dominique S Michaud; Sara H Olson; Kim Overvad; Alpa V Patel; Petra H M Peeters; Aleksandar Rajkovic; Elio Riboli; Harvey A Risch; Xiao-Ou Shu; Gilles Thomas; Geoffrey S Tobias; Dimitrios Trichopoulos; Stephen K Van Den Eeden; Jarmo Virtamo; Jean Wactawski-Wende; Brian M Wolpin; Herbert Yu; Kai Yu; Anne Zeleniuch-Jacquotte; Stephen J Chanock; Patricia Hartge; Robert N Hoover
Journal:  Nat Genet       Date:  2009-08-02       Impact factor: 38.330

5.  Lung cancer susceptibility locus at 5p15.33.

Authors:  James D McKay; Rayjean J Hung; Valerie Gaborieau; Paolo Boffetta; Amelie Chabrier; Graham Byrnes; David Zaridze; Anush Mukeria; Neonilia Szeszenia-Dabrowska; Jolanta Lissowska; Peter Rudnai; Eleonora Fabianova; Dana Mates; Vladimir Bencko; Lenka Foretova; Vladimir Janout; John McLaughlin; Frances Shepherd; Alexandre Montpetit; Steven Narod; Hans E Krokan; Frank Skorpen; Maiken Bratt Elvestad; Lars Vatten; Inger Njølstad; Tomas Axelsson; Chu Chen; Gary Goodman; Matt Barnett; Melissa M Loomis; Jan Lubiñski; Joanna Matyjasik; Marcin Lener; Dorota Oszutowska; John Field; Triantafillos Liloglou; George Xinarianos; Adrian Cassidy; Paolo Vineis; Francoise Clavel-Chapelon; Domenico Palli; Rosario Tumino; Vittorio Krogh; Salvatore Panico; Carlos A González; José Ramón Quirós; Carmen Martínez; Carmen Navarro; Eva Ardanaz; Nerea Larrañaga; Kay Tee Kham; Timothy Key; H Bas Bueno-de-Mesquita; Petra Hm Peeters; Antonia Trichopoulou; Jakob Linseisen; Heiner Boeing; Göran Hallmans; Kim Overvad; Anne Tjønneland; Merethe Kumle; Elio Riboli; Diana Zelenika; Anne Boland; Marc Delepine; Mario Foglio; Doris Lechner; Fumihiko Matsuda; Helene Blanche; Ivo Gut; Simon Heath; Mark Lathrop; Paul Brennan
Journal:  Nat Genet       Date:  2008-11-02       Impact factor: 38.330

Review 6.  The multifaceted roles of the receptor tyrosine kinase ROS in development and cancer.

Authors:  Jaime Acquaviva; Ricky Wong; Al Charest
Journal:  Biochim Biophys Acta       Date:  2008-08-03

7.  Common 5p15.33 and 6p21.33 variants influence lung cancer risk.

Authors:  Yufei Wang; Peter Broderick; Emily Webb; Xifeng Wu; Jayaram Vijayakrishnan; Athena Matakidou; Mobshra Qureshi; Qiong Dong; Xiangjun Gu; Wei Vivien Chen; Margaret R Spitz; Timothy Eisen; Christopher I Amos; Richard S Houlston
Journal:  Nat Genet       Date:  2008-11-02       Impact factor: 38.330

8.  Lung cancer occurrence in never-smokers: an analysis of 13 cohorts and 22 cancer registry studies.

Authors:  Michael J Thun; Lindsay M Hannan; Lucile L Adams-Campbell; Paolo Boffetta; Julie E Buring; Diane Feskanich; W Dana Flanders; Sun Ha Jee; Kota Katanoda; Laurence N Kolonel; I-Min Lee; Tomomi Marugame; Julie R Palmer; Elio Riboli; Tomotaka Sobue; Erika Avila-Tang; Lynne R Wilkens; Jon M Samet
Journal:  PLoS Med       Date:  2008-09-09       Impact factor: 11.069

9.  A flexible and accurate genotype imputation method for the next generation of genome-wide association studies.

Authors:  Bryan N Howie; Peter Donnelly; Jonathan Marchini
Journal:  PLoS Genet       Date:  2009-06-19       Impact factor: 5.917

10.  Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study.

Authors:  Mark S Silverberg; Judy H Cho; John D Rioux; Dermot P B McGovern; Jing Wu; Vito Annese; Jean-Paul Achkar; Philippe Goyette; Regan Scott; Wei Xu; M Michael Barmada; Lambertus Klei; Mark J Daly; Clara Abraham; Theodore M Bayless; Fabrizio Bossa; Anne M Griffiths; Andrew F Ippoliti; Raymond G Lahaie; Anna Latiano; Pierre Paré; Deborah D Proctor; Miguel D Regueiro; A Hillary Steinhart; Stephan R Targan; L Philip Schumm; Emily O Kistner; Annette T Lee; Peter K Gregersen; Jerome I Rotter; Steven R Brant; Kent D Taylor; Kathryn Roeder; Richard H Duerr
Journal:  Nat Genet       Date:  2009-01-04       Impact factor: 38.330

View more
  143 in total

1.  Fine mapping of chromosome 5p15.33 based on a targeted deep sequencing and high density genotyping identifies novel lung cancer susceptibility loci.

Authors:  Linda Kachuri; Christopher I Amos; James D McKay; Mattias Johansson; Paolo Vineis; H Bas Bueno-de-Mesquita; Marie-Christine Boutron-Ruault; Mikael Johansson; J Ramón Quirós; Sabina Sieri; Ruth C Travis; Elisabete Weiderpass; Loic Le Marchand; Brian E Henderson; Lynne Wilkens; Gary E Goodman; Chu Chen; Jennifer A Doherty; David C Christiani; Yongyue Wei; Li Su; Shelley Tworoger; Xuehong Zhang; Peter Kraft; David Zaridze; John K Field; Michael W Marcus; Michael P A Davies; Russell Hyde; Neil E Caporaso; Maria Teresa Landi; Gianluca Severi; Graham G Giles; Geoffrey Liu; John R McLaughlin; Yafang Li; Xiangjun Xiao; Gord Fehringer; Xuchen Zong; Robert E Denroche; Philip C Zuzarte; John D McPherson; Paul Brennan; Rayjean J Hung
Journal:  Carcinogenesis       Date:  2015-11-20       Impact factor: 4.944

2.  Genome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population.

Authors:  Krista A Zanetti; Zhaoming Wang; Melinda Aldrich; Christopher I Amos; William J Blot; Elise D Bowman; Laurie Burdette; Qiuyin Cai; Neil Caporaso; Charles C Chung; Elizabeth M Gillanders; Christopher A Haiman; Helen M Hansen; Brian E Henderson; Laurence N Kolonel; Loic Le Marchand; Shengchao Li; Lorna Haughton McNeill; Bríd M Ryan; Ann G Schwartz; Jennette D Sison; Margaret R Spitz; Margaret Tucker; Angela S Wenzlaff; John K Wiencke; Lynne Wilkens; Margaret R Wrensch; Xifeng Wu; Wei Zheng; Weiyin Zhou; David Christiani; Julie R Palmer; Trevor M Penning; Alyssa G Rieber; Lynn Rosenberg; Edward A Ruiz-Narvaez; Li Su; Anil Vachani; Yongyue Wei; Alexander S Whitehead; Stephen J Chanock; Curtis C Harris
Journal:  Lung Cancer       Date:  2016-05-13       Impact factor: 5.705

Review 3.  Biochemical transformation of bacterial lipopolysaccharides by acyloxyacyl hydrolase reduces host injury and promotes recovery.

Authors:  Robert S Munford; Jerrold P Weiss; Mingfang Lu
Journal:  J Biol Chem       Date:  2020-12-18       Impact factor: 5.157

4.  Association of the functional BCL-2 rs2279115 genetic variant and small cell lung cancer.

Authors:  Xinyu Yang; Feng Gao; Fei Ma; Yanli Ren; Hongwei Chen; Xue Liang; Sichong Han; Xiangyu Xiong; Wenting Pan; Changchun Zhou; Liqing Zhou; Ming Yang
Journal:  Tumour Biol       Date:  2015-08-27

Review 5.  Genome-Wide Association Studies of Cancer in Diverse Populations.

Authors:  Sungshim L Park; Iona Cheng; Christopher A Haiman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2017-06-21       Impact factor: 4.254

6.  Quantitative assessment of the influence of common variations (rs8034191 and rs1051730) at 15q25 and lung cancer risk.

Authors:  Bin Hu; Ying Huang; Rong-huan Yu; Hong-ju Mao; Chao Guan; Jing Zhao
Journal:  Tumour Biol       Date:  2013-11-20

7.  Low-frequency coding variants at 6p21.33 and 20q11.21 are associated with lung cancer risk in Chinese populations.

Authors:  Guangfu Jin; Meng Zhu; Rong Yin; Wei Shen; Jia Liu; Jie Sun; Cheng Wang; Juncheng Dai; Hongxia Ma; Chen Wu; Zhihua Yin; Jiaqi Huang; Brandon W Higgs; Lin Xu; Yihong Yao; David C Christiani; Christopher I Amos; Zhibin Hu; Baosen Zhou; Yongyong Shi; Dongxin Lin; Hongbing Shen
Journal:  Am J Hum Genet       Date:  2015-04-30       Impact factor: 11.025

8.  A genome-wide gene-gene interaction analysis identifies an epistatic gene pair for lung cancer susceptibility in Han Chinese.

Authors:  Minjie Chu; Ruyang Zhang; Yang Zhao; Chen Wu; Huan Guo; Baosen Zhou; Jiachun Lu; Yongyong Shi; Juncheng Dai; Guangfu Jin; Hongxia Ma; Jing Dong; Yongyue Wei; Cheng Wang; Jianhang Gong; Chongqi Sun; Meng Zhu; Yongyong Qiu; Tangchun Wu; Zhibin Hu; Dongxin Lin; Hongbing Shen; Feng Chen
Journal:  Carcinogenesis       Date:  2013-12-09       Impact factor: 4.944

9.  Genetic Modifiers of Progression-Free Survival in Never-Smoking Lung Adenocarcinoma Patients Treated with First-Line Tyrosine Kinase Inhibitors.

Authors:  I-Shou Chang; Shih Sheng Jiang; James Chih-Hsin Yang; Wu-Chou Su; Li-Hsin Chien; Chin-Fu Hsiao; Jih-Hsiang Lee; Chih-Yi Chen; Chung-Hsing Chen; Gee-Chen Chang; Zhaoming Wang; Fang-Yi Lo; Kuan-Yu Chen; Wen-Chang Wang; Yuh-Min Chen; Ming-Shyan Huang; Ying-Huang Tsai; Yu-Chun Su; Wan-Shan Hsieh; Wen-Chi Shih; Shwn-Huey Shieh; Tsung-Ying Yang; Qing Lan; Nathaniel Rothman; Chien-Jen Chen; Stephen J Chanock; Pan-Chyr Yang; Chao A Hsiung
Journal:  Am J Respir Crit Care Med       Date:  2017-03-01       Impact factor: 21.405

Review 10.  Women and lung cancer: what is new?

Authors:  Crystal M North; David C Christiani
Journal:  Semin Thorac Cardiovasc Surg       Date:  2013
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.