Literature DB >> 27660804

Automatic pericardium segmentation and quantification of epicardial fat from computed tomography angiography.

Alexander Norlén1, Jennifer Alvén1, David Molnar2, Olof Enqvist2, Rauni Rossi Norrlund2, John Brandberg2, Göran Bergström2, Fredrik Kahl3.   

Abstract

Recent findings indicate a strong correlation between the risk of future heart disease and the volume of adipose tissue inside of the pericardium. So far, large-scale studies have been hindered by the fact that manual delineation of the pericardium is extremely time-consuming and that existing methods for automatic delineation lack accuracy. An efficient and fully automatic approach to pericardium segmentation and epicardial fat volume (EFV) estimation is presented, based on a variant of multi-atlas segmentation for spatial initialization and a random forest classifier for accurate pericardium detection. Experimental validation on a set of 30 manually delineated computer tomography angiography volumes shows a significant improvement on state-of-the-art in terms of EFV estimation [mean absolute EFV difference: 3.8 ml (4.7%), Pearson correlation: 0.99] with run times suitable for large-scale studies (52 s). Further, the results compare favorably with interobserver variability measured on 10 volumes.

Entities:  

Keywords:  computed tomography angiography; epicardial fat quantification; machine learning; pericardium; segmentation

Year:  2016        PMID: 27660804      PMCID: PMC5023657          DOI: 10.1117/1.JMI.3.3.034003

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  11 in total

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Authors:  Yuri Boykov; Vladimir Kolmogorov
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2004-09       Impact factor: 6.226

2.  Automatic quantification of epicardial fat volume on non-enhanced cardiac CT scans using a multi-atlas segmentation approach.

Authors:  Rahil Shahzad; Daniel Bos; Coert Metz; Alexia Rossi; Hortense Kirisli; Aad van der Lugt; Stefan Klein; Jacqueline Witteman; Pim de Feyter; Wiro Niessen; Lucas van Vliet; Theo van Walsum
Journal:  Med Phys       Date:  2013-09       Impact factor: 4.071

3.  Multi-atlas based segmentation using probabilistic label fusion with adaptive weighting of image similarity measures.

Authors:  C Sjöberg; A Ahnesjö
Journal:  Comput Methods Programs Biomed       Date:  2013-01-20       Impact factor: 5.428

4.  A multicompartment body composition technique based on computerized tomography.

Authors:  B Chowdhury; L Sjöström; M Alpsten; J Kostanty; H Kvist; R Löfgren
Journal:  Int J Obes Relat Metab Disord       Date:  1994-04

5.  Automated algorithm for atlas-based segmentation of the heart and pericardium from non-contrast CT.

Authors:  Damini Dey; Amit Ramesh; Piotr J Slomka; Ryo Nakazato; Victor Y Cheng; Guido Germano; Daniel S Berman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2010-03-01

Review 6.  Epicardial and thoracic fat - Noninvasive measurement and clinical implications.

Authors:  Damini Dey; Ryo Nakazato; Debiao Li; Daniel S Berman
Journal:  Cardiovasc Diagn Ther       Date:  2012-06

7.  Automated pericardium delineation and epicardial fat volume quantification from noncontrast CT.

Authors:  Xiaowei Ding; Demetri Terzopoulos; Mariana Diaz-Zamudio; Daniel S Berman; Piotr J Slomka; Damini Dey
Journal:  Med Phys       Date:  2015-09       Impact factor: 4.071

8.  Automated quantification of epicardial adipose tissue using CT angiography: evaluation of a prototype software.

Authors:  James V Spearman; Felix G Meinel; U Joseph Schoepf; Paul Apfaltrer; Justin R Silverman; Aleksander W Krazinski; Christian Canstein; Carlo Nicola De Cecco; Philip Costello; Lucas L Geyer
Journal:  Eur Radiol       Date:  2013-11-06       Impact factor: 5.315

9.  Multi-Atlas Segmentation with Joint Label Fusion.

Authors:  Hongzhi Wang; Jung W Suh; Sandhitsu R Das; John B Pluta; Caryne Craige; Paul A Yushkevich
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-06-26       Impact factor: 6.226

10.  The Swedish CArdioPulmonary BioImage Study: objectives and design.

Authors:  G Bergström; G Berglund; A Blomberg; J Brandberg; G Engström; J Engvall; M Eriksson; U de Faire; A Flinck; M G Hansson; B Hedblad; O Hjelmgren; C Janson; T Jernberg; Å Johnsson; L Johansson; L Lind; C-G Löfdahl; O Melander; C J Östgren; A Persson; M Persson; A Sandström; C Schmidt; S Söderberg; J Sundström; K Toren; A Waldenström; H Wedel; J Vikgren; B Fagerberg; A Rosengren
Journal:  J Intern Med       Date:  2015-06-19       Impact factor: 8.989

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  7 in total

1.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

Review 2.  Machine Learning Approaches in Cardiovascular Imaging.

Authors:  Mir Henglin; Gillian Stein; Pavel V Hushcha; Jasper Snoek; Alexander B Wiltschko; Susan Cheng
Journal:  Circ Cardiovasc Imaging       Date:  2017-10       Impact factor: 7.792

3.  Artificial intelligence in medical imaging: A radiomic guide to precision phenotyping of cardiovascular disease.

Authors:  Evangelos K Oikonomou; Musib Siddique; Charalambos Antoniades
Journal:  Cardiovasc Res       Date:  2020-11-01       Impact factor: 10.787

Review 4.  Machine learning applications in cardiac computed tomography: a composite systematic review.

Authors:  Jonathan James Hyett Bray; Moghees Ahmad Hanif; Mohammad Alradhawi; Jacob Ibbetson; Surinder Singh Dosanjh; Sabrina Lucy Smith; Mahmood Ahmad; Dominic Pimenta
Journal:  Eur Heart J Open       Date:  2022-03-17

5.  Deep Learning for Quantification of Epicardial and Thoracic Adipose Tissue From Non-Contrast CT.

Authors:  Frederic Commandeur; Markus Goeller; Julian Betancur; Sebastien Cadet; Mhairi Doris; Xi Chen; Daniel S Berman; Piotr J Slomka; Balaji K Tamarappoo; Damini Dey
Journal:  IEEE Trans Med Imaging       Date:  2018-02-09       Impact factor: 10.048

6.  Artificial intelligence based automatic quantification of epicardial adipose tissue suitable for large scale population studies.

Authors:  David Molnar; Olof Enqvist; Johannes Ulén; Måns Larsson; John Brandberg; Åse A Johnsson; Elias Björnson; Göran Bergström; Ola Hjelmgren
Journal:  Sci Rep       Date:  2021-12-13       Impact factor: 4.379

7.  Fully Automated CT Quantification of Epicardial Adipose Tissue by Deep Learning: A Multicenter Study.

Authors:  Frederic Commandeur; Markus Goeller; Aryabod Razipour; Sebastien Cadet; Michaela M Hell; Jacek Kwiecinski; Xi Chen; Hyuk-Jae Chang; Mohamed Marwan; Stephan Achenbach; Daniel S Berman; Piotr J Slomka; Balaji K Tamarappoo; Damini Dey
Journal:  Radiol Artif Intell       Date:  2019-11-27
  7 in total

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