Literature DB >> 27657869

Force-induced tautomerization in a single molecule.

Janina N Ladenthin1, Thomas Frederiksen2,3, Mats Persson4, John C Sharp4, Sylwester Gawinkowski5, Jacek Waluk5,6, Takashi Kumagai1.   

Abstract

Heat transfer, electrical potential and light energy are common ways to activate chemical reactions. Applied force is another way, but dedicated studies for such a mechanical activation are limited, and this activation is poorly understood at the single-molecule level. Here, we report force-induced tautomerization in a single porphycene molecule on a Cu(110) surface at 5 K, which is studied by scanning probe microscopy and density functional theory calculations. Force spectroscopy quantifies the force needed to trigger tautomerization with submolecular spatial resolution. The calculations show how the reaction pathway and barrier of tautomerization are modified in the presence of a copper tip and reveal the atomistic origin of the process. Moreover, we demonstrate that a chemically inert tip whose apex is terminated by a xenon atom cannot induce the reaction because of a weak interaction with porphycene and a strong relaxation of xenon on the tip as contact to the molecule is formed.

Entities:  

Year:  2016        PMID: 27657869     DOI: 10.1038/nchem.2552

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  33 in total

1.  Direct determination of the energy required to operate a single molecule switch.

Authors:  Ch Loppacher; M Guggisberg; O Pfeiffer; E Meyer; M Bammerlin; R Lüthi; R Schlittler; J K Gimzewski; H Tang; C Joachim
Journal:  Phys Rev Lett       Date:  2003-02-14       Impact factor: 9.161

2.  Mechanochemistry: the mechanical activation of covalent bonds.

Authors:  Martin K Beyer; Hauke Clausen-Schaumann
Journal:  Chem Rev       Date:  2005-08       Impact factor: 60.622

3.  Ground- and excited-state tautomerization rates in porphycenes.

Authors:  P Fita; N Urbańska; C Radzewicz; J Waluk
Journal:  Chemistry       Date:  2009       Impact factor: 5.236

4.  Role of tip chemical reactivity on atom manipulation process in dynamic force microscopy.

Authors:  Yoshiaki Sugimoto; Ayhan Yurtsever; Masayuki Abe; Seizo Morita; Martin Ondráček; Pablo Pou; Ruben Pérez; Pavel Jelínek
Journal:  ACS Nano       Date:  2013-08-01       Impact factor: 15.881

5.  Efficient implementation of a van der Waals density functional: application to double-wall carbon nanotubes.

Authors:  Guillermo Román-Pérez; José M Soler
Journal:  Phys Rev Lett       Date:  2009-08-27       Impact factor: 9.161

6.  Hot Carrier-Induced Tautomerization within a Single Porphycene Molecule on Cu(111).

Authors:  Janina N Ladenthin; Leonhard Grill; Sylwester Gawinkowski; Shuyi Liu; Jacek Waluk; Takashi Kumagai
Journal:  ACS Nano       Date:  2015-06-12       Impact factor: 15.881

7.  Forces during the controlled displacement of organic molecules.

Authors:  G Langewisch; J Falter; H Fuchs; A Schirmeisen
Journal:  Phys Rev Lett       Date:  2013-01-15       Impact factor: 9.161

8.  Tautomerism in porphycenes: analysis of rate-affecting factors.

Authors:  Piotr Ciąćka; Piotr Fita; Arkadiusz Listkowski; Michał Kijak; Santi Nonell; Daiki Kuzuhara; Hiroko Yamada; Czesław Radzewicz; Jacek Waluk
Journal:  J Phys Chem B       Date:  2014-08-19       Impact factor: 2.991

9.  Interplay between Switching Driven by the Tunneling Current and Atomic Force of a Bistable Four-Atom Si Quantum Dot.

Authors:  Shiro Yamazaki; Keisuke Maeda; Yoshiaki Sugimoto; Masayuki Abe; Vladimír Zobač; Pablo Pou; Lucia Rodrigo; Pingo Mutombo; Ruben Pérez; Pavel Jelínek; Seizo Morita
Journal:  Nano Lett       Date:  2015-06-03       Impact factor: 11.189

10.  Calibration of quartz tuning fork spring constants for non-contact atomic force microscopy: direct mechanical measurements and simulations.

Authors:  Jens Falter; Marvin Stiefermann; Gernot Langewisch; Philipp Schurig; Hendrik Hölscher; Harald Fuchs; André Schirmeisen
Journal:  Beilstein J Nanotechnol       Date:  2014-04-23       Impact factor: 3.649

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  6 in total

1.  Vibrations of a molecule in an external force field.

Authors:  Norio Okabayashi; Angelo Peronio; Magnus Paulsson; Toyoko Arai; Franz J Giessibl
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-16       Impact factor: 11.205

2.  Fine-Tuning of Nonlinear Optical Contrasts of Hexaphyrin-Based Molecular Switches Using Inverse Design.

Authors:  Eline Desmedt; Tatiana Woller; Jos L Teunissen; Freija De Vleeschouwer; Mercedes Alonso
Journal:  Front Chem       Date:  2021-12-03       Impact factor: 5.221

3.  Gram-scale synthesis of porphycenes through acid-catalyzed oxidative macrocyclizations of E/Z-mixed 5,6-diaryldipyrroethenes.

Authors:  Toshikazu Ono; Ning Xu; Daiki Koga; Toshihiro Ideo; Manabu Sugimoto; Yoshio Hisaeda
Journal:  RSC Adv       Date:  2018-11-26       Impact factor: 3.361

4.  Differences in the mechanical unfolding pathways of apo- and copper-bound azurins.

Authors:  Anju Yadav; Sanjoy Paul; Ravindra Venkatramani; Sri Rama Koti Ainavarapu
Journal:  Sci Rep       Date:  2018-01-31       Impact factor: 4.379

5.  Direct observation of single-molecule hydrogen-bond dynamics with single-bond resolution.

Authors:  Ce Zhou; Xingxing Li; Zhongliang Gong; Chuancheng Jia; Yuanwei Lin; Chunhui Gu; Gen He; Yuwu Zhong; Jinlong Yang; Xuefeng Guo
Journal:  Nat Commun       Date:  2018-02-23       Impact factor: 14.919

6.  Forcing the reversibility of a mechanochemical reaction.

Authors:  Amy E M Beedle; Marc Mora; Colin T Davis; Ambrosius P Snijders; Guillaume Stirnemann; Sergi Garcia-Manyes
Journal:  Nat Commun       Date:  2018-08-08       Impact factor: 14.919

  6 in total

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