Literature DB >> 19792809

Efficient implementation of a van der Waals density functional: application to double-wall carbon nanotubes.

Guillermo Román-Pérez1, José M Soler.   

Abstract

We present an efficient implementation of the van der Waals density functional of Dion et al. [Phys. Rev. Lett. 92, 246401 (2004)], which expresses the nonlocal correlation energy as a double spatial integral. We factorize the integration kernel and use fast Fourier transforms to evaluate the self-consistent potential, total energy, and atomic forces, in O(NlogN) operations. The resulting overhead, for medium and large systems, is a small fraction of the total computational cost, representing a dramatic speedup over the O(N(2)) evaluation of the double integral. This opens the realm of first-principles simulations to the large systems of interest in soft matter and biomolecular problems. We apply the method to calculate the binding energies and the barriers for relative translation and rotation in double-wall carbon nanotubes.

Entities:  

Year:  2009        PMID: 19792809     DOI: 10.1103/PhysRevLett.103.096102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  81 in total

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2.  Elastic properties of bulk and low-dimensional materials using Van der Waals density functional.

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Authors:  Chi Ming Yim; Chi L Pang; Diego R Hermoso; Coinneach M Dover; Christopher A Muryn; Francesco Maccherozzi; Sarnjeet S Dhesi; Rubén Pérez; Geoff Thornton
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-15       Impact factor: 11.205

5.  Arginine-phosphate salt bridges between histones and DNA: intermolecular actuators that control nucleosome architecture.

Authors:  Tahir I Yusufaly; Yun Li; Gautam Singh; Wilma K Olson
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6.  High-pressure phase of brucite stable at Earth's mantle transition zone and lower mantle conditions.

Authors:  Andreas Hermann; Mainak Mookherjee
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-21       Impact factor: 11.205

7.  First principles-based multiscale atomistic methods for input into first principles nonequilibrium transport across interfaces.

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Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-03       Impact factor: 11.205

8.  Ab initio carbon capture in open-site metal-organic frameworks.

Authors:  Allison L Dzubak; Li-Chiang Lin; Jihan Kim; Joseph A Swisher; Roberta Poloni; Sergey N Maximoff; Berend Smit; Laura Gagliardi
Journal:  Nat Chem       Date:  2012-08-19       Impact factor: 24.427

9.  First-principles vdW-DF study on the enhanced hydrogen storage capacity of Pt-adsorbed graphene.

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Journal:  J Mol Model       Date:  2014-04-29       Impact factor: 1.810

10.  Controlled Sculpture of Black Phosphorus Nanoribbons.

Authors:  Paul Masih Das; Gopinath Danda; Andrew Cupo; William M Parkin; Liangbo Liang; Neerav Kharche; Xi Ling; Shengxi Huang; Mildred S Dresselhaus; Vincent Meunier; Marija Drndić
Journal:  ACS Nano       Date:  2016-05-24       Impact factor: 15.881

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