Literature DB >> 27655558

Molecular and ecological investigations on the wild populations of Glycyrrhiza L. taxa distributed in the East Mediterranean Area of Turkey.

Volkan Altay1, Faruk Karahan2, Munir Öztürk3,4, Khalid Rehman Hakeem5, Emre Ilhan6, Mustafa Erayman2.   

Abstract

This paper covers studies on the molecular and ecological aspects of G. glabra var. glandulifera, G. flavescens ssp. flavescens and G. echinata collected from Hatay (Turkey); with the aim to better understand their genetic variation and ecological requirements for possible conservation programs. The material including total genomic DNA was extracted by the CTAB, and for PCR reaction, a total of 14 SSR primers developed for Medicago truncatula were used. PCR amplifications were performed in a Multigen® Thermal Cycler. Soil samples were analysed for their texture, pH, total soluble salts, calcium carbonate, total N content, total phosphorus and organic matter content. In order to see the association between genetic, ecological and geographical data, a similarity matrix was generated. Genetic similarity distances between genotypes were correlated with those of Eucledian distances obtained from ecological and geographical data. Analysis of molecular variance (AMOVA) was performed using GenAlEx 6.5 software to determine variation among and within genetic variations. The genetic analysis showed that the highest expected heterozygosity values were obtained from G. glabra while the lowest were obtained from G. echinata. In general heterozygosity values were low, especially for G. echinata. Therefore, variation appears to be lower within each species than among three species. The physical and chemical analysis of soil and plant samples indicates that mineral accumulation in plants is substantially affected by the soil characteristics. There is a need for identification of better strategies for the improvement of varieties, especially for small farmers managing marginal soils. More studies should be conducted in order to safeguard these taxa, especially G. glabra var. glandulifera which is collected intensively due to its economic value, the same is true for endemic taxon G. flavescens ssp. flavescens.

Entities:  

Keywords:  East Mediterranean; Glycyrrhiza; Molecular ecology; SSRs

Mesh:

Year:  2016        PMID: 27655558     DOI: 10.1007/s10265-016-0864-6

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  13 in total

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3.  Plant diversity in mediterranean-climate regions.

Authors:  R M Cowling; P W Rundel; B B Lamont; M Kalin Arroyo; M Arianoutsou
Journal:  Trends Ecol Evol       Date:  1996-09       Impact factor: 17.712

4.  Rapid isolation of high molecular weight plant DNA.

Authors:  M G Murray; W F Thompson
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

5.  RAPD variation among and within small and large populations of the rare clonal plant Ranunculus reptans (Ranunculaceae).

Authors:  M Fischer; R Husi; D Prati; M Peintinger; M Kleunen; B Schmid
Journal:  Am J Bot       Date:  2000-08       Impact factor: 3.844

6.  SILICON.

Authors:  Emanuel Epstein
Journal:  Annu Rev Plant Physiol Plant Mol Biol       Date:  1999-06

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Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937

8.  Molecular identification of commercialized medicinal plants in southern Morocco.

Authors:  Anneleen Kool; Hugo J de Boer; Asa Krüger; Anders Rydberg; Abdelaziz Abbad; Lars Björk; Gary Martin
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Review 10.  Review of pharmacological effects of Glycyrrhiza sp. and its bioactive compounds.

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Journal:  Phytother Res       Date:  2008-06       Impact factor: 5.878

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2.  Phytochemical Analysis and Habitat Suitability Mapping of Glycyrrhiza glabra L. Collected in the Hatay Region of Turkey.

Authors:  Doaa H M Alsaadi; Aedla Raju; Ken Kusakari; Faruk Karahan; Nazim Sekeroglu; Takashi Watanabe
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