Literature DB >> 27652382

A historical and evolutionary perspective on the biological significance of circulating DNA and extracellular vesicles.

Janine Aucamp1, Abel J Bronkhorst2, Christoffel P S Badenhorst3, Piet J Pretorius2.   

Abstract

The discovery of quantitative and qualitative differences of the circulating DNA (cirDNA) between healthy and diseased individuals inclined researchers to investigate these molecules as potential biomarkers for non-invasive diagnosis and prognosis of various pathologies. However, except for some prenatal tests, cirDNA analyses have not been readily translated to clinical practice due to a lack of knowledge regarding its composition, function, and biological and evolutionary origins. We believe that, to fully grasp the nature of cirDNA and the extracellular vesicles (EVs) and protein complexes with which it is associated, it is necessary to probe the early and badly neglected work that contributed to the discovery and development of these concepts. Accordingly, this review consists of a schematic summary of the major events that developed and integrated the concepts of heredity, genetic information, cirDNA, EVs, and protein complexes. CirDNA enters target cells and provokes a myriad of gene regulatory effects associated with the messaging functions of various natures, disease progression, somatic genome variation, and transgenerational inheritance. This challenges the traditional views on each of the former topics. All of these discoveries can be traced directly back to the iconic works of Darwin, Lamarck, and their followers. The history of cirDNA that has been revisited here is rich in information that should be considered in clinical practice, when designing new experiments, and should be very useful for generating an empirically up-to-date view of cirDNA and EVs. Furthermore, we hope that it will invite many flights of speculation and stimulate further inquiry into its biological and evolutionary origins.

Keywords:  Genometastasis; Inheritance of acquired characteristics; Lateral gene transfer; Metabolic DNA; Pangenesis; Virtosomes

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Substances:

Year:  2016        PMID: 27652382     DOI: 10.1007/s00018-016-2370-3

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  169 in total

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3.  In vitro stimulation by tumour cell media of [3H]-thymidine incorporation by mouse spleen lymphocytes.

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Review 4.  Cell-free DNA: Preanalytical variables.

Authors:  Abel Jacobus Bronkhorst; Janine Aucamp; Piet J Pretorius
Journal:  Clin Chim Acta       Date:  2015-09-02       Impact factor: 3.786

5.  Unequal representation of different unique genomic DNA sequences in the cell-free plasma DNA of individual donors.

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Journal:  Clin Biochem       Date:  2008-12-03       Impact factor: 3.281

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8.  MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins.

Authors:  Kasey C Vickers; Brian T Palmisano; Bassem M Shoucri; Robert D Shamburek; Alan T Remaley
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9.  Exosomes and HIV Gag bud from endosome-like domains of the T cell plasma membrane.

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Journal:  J Cell Biol       Date:  2006-03-13       Impact factor: 10.539

10.  Stability of DNA in Purkinje cell nuclei of the mouse. An autoradiographic study.

Authors:  V Mares; B Schultze; W Maurer
Journal:  J Cell Biol       Date:  1974-11       Impact factor: 10.539

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  14 in total

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Review 4.  The role of extracellular DNA (exDNA) in cellular processes.

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Review 5.  Extracellular DNA in natural environments: features, relevance and applications.

Authors:  Magdalena Nagler; Heribert Insam; Giacomo Pietramellara; Judith Ascher-Jenull
Journal:  Appl Microbiol Biotechnol       Date:  2018-06-01       Impact factor: 4.813

6.  New insights into structural features and optimal detection of circulating tumor DNA determined by single-strand DNA analysis.

Authors:  Cynthia Sanchez; Matthew W Snyder; Rita Tanos; Jay Shendure; Alain R Thierry
Journal:  NPJ Genom Med       Date:  2018-11-23       Impact factor: 8.617

7.  Quantifying circulating cell-free DNA in humans.

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8.  Increased Transfection of the Easily Oxidizable GC-Rich DNA Fragments into the MCF7 Breast Cancer Cell.

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Review 9.  Critical Review of the Evolution of Extracellular Vesicles' Knowledge: From 1946 to Today.

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Journal:  Int J Mol Sci       Date:  2021-06-15       Impact factor: 5.923

10.  Changes in circulating cell-free nuclear DNA and mitochondrial DNA of patients with adolescent idiopathic scoliosis.

Authors:  Jiong Li; Longjie Wang; Guanteng Yang; Yunjia Wang; Chaofeng Guo; Shaohua Liu; Qile Gao; Hongqi Zhang
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