Literature DB >> 27637788

Metabolomics as read-across tool: A case study with phenoxy herbicides.

B van Ravenzwaay1, S Sperber2, O Lemke2, E Fabian2, F Faulhammer2, H Kamp2, W Mellert2, V Strauss2, A Strigun3, E Peter3, M Spitzer3, T Walk3.   

Abstract

New technologies, such as metabolomics, can address chemical grouping and read across from a biological perspective. In a virtual case study, we selected MCPP as target substance and MCPA and 2,4-DP as source substances with the goal to waive a 90-day study with MCPP. In order to develop a convincing case to show how biological data can substantiate read across, we used metabolomics on blood samples from the 28-day studies to show the qualitative and quantitative similarity of the substances. The 28-day metabolome evaluation of source substances and the target substance indicate liver and kidneys as target organs. 2,4-DP was identified as the best source substance. Using the information of the 90-day 2,4-DP study, we predicted MCPP's toxicity profile at 2500 ppm: reduced food consumption and body weight gain, liver and kidney weight increases with clinical-pathology changes and a moderate red blood cell parameter reduction. NOEL prediction for MCPP was below that of 2,4-DP (<500 ppm), and similar to that of MCPA (≥150 ppm). Qualitatively, these predictions are comparable to the results of the real MCPP 90-day study in rats (reduced food consumption and body weight gain, weight increases and clinical-pathology changes in liver and kidneys, reduced red blood cells values). Quantitatively, the predicted NOAEL (150 ppm) is similar to the actual study (NOEL = 75 ppm, NOAEL ≤ 500 ppm). Thus, the 90-day rat toxicity study of MCPP could have been waived and substituted by the 90-day results of 2,4-DP by using metabolome data of 28 day studies. Copyright Â
© 2016 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Metabolomics; Prediction; REACH; Rat; Read across; Toxicity

Mesh:

Substances:

Year:  2016        PMID: 27637788     DOI: 10.1016/j.yrtph.2016.09.013

Source DB:  PubMed          Journal:  Regul Toxicol Pharmacol        ISSN: 0273-2300            Impact factor:   3.271


  12 in total

1.  Using metabolomics to assess the sub-lethal effects of zinc and boscalid on an estuarine polychaete worm over time.

Authors:  Georgia M Sinclair; Allyson L O'Brien; Michael Keough; David P De Souza; Saravanan Dayalan; Komal Kanojia; Konstantinos Kouremenos; Dedreia L Tull; Rhys A Coleman; Oliver A H Jones; Sara M Long
Journal:  Metabolomics       Date:  2019-07-31       Impact factor: 4.290

Review 2.  Framework for the quality assurance of 'omics technologies considering GLP requirements.

Authors:  Hans-Martin Kauffmann; Hennicke Kamp; Regine Fuchs; Brian N Chorley; Lize Deferme; Timothy Ebbels; Jörg Hackermüller; Stefania Perdichizzi; Alan Poole; Ursula G Sauer; Knut E Tollefsen; Tewes Tralau; Carole Yauk; Ben van Ravenzwaay
Journal:  Regul Toxicol Pharmacol       Date:  2017-10-05       Impact factor: 3.271

3.  Progress towards an OECD reporting framework for transcriptomics and metabolomics in regulatory toxicology.

Authors:  Joshua A Harrill; Mark R Viant; Carole L Yauk; Magdalini Sachana; Timothy W Gant; Scott S Auerbach; Richard D Beger; Mounir Bouhifd; Jason O'Brien; Lyle Burgoon; Florian Caiment; Donatella Carpi; Tao Chen; Brian N Chorley; John Colbourne; Raffaella Corvi; Laurent Debrauwer; Claire O'Donovan; Timothy M D Ebbels; Drew R Ekman; Frank Faulhammer; Laura Gribaldo; Gina M Hilton; Stephanie P Jones; Aniko Kende; Thomas N Lawson; Sofia B Leite; Pim E G Leonards; Mirjam Luijten; Alberto Martin; Laura Moussa; Serge Rudaz; Oliver Schmitz; Tomasz Sobanski; Volker Strauss; Monica Vaccari; Vikrant Vijay; Ralf J M Weber; Antony J Williams; Andrew Williams; Russell S Thomas; Maurice Whelan
Journal:  Regul Toxicol Pharmacol       Date:  2021-07-29       Impact factor: 3.598

4.  Internationalization of read-across as a validated new approach method (NAM) for regulatory toxicology.

Authors:  Costanza Rovida; Tara Barton-Maclaren; Emilio Benfenati; Francesca Caloni; P. Charukeshi Chandrasekera; Christophe Chesné; Mark T D Cronin; Joop De Knecht; Daniel R Dietrich; Sylvia E Escher; Suzanne Fitzpatrick; Brenna Flannery; Matthias Herzler; Susanne Hougaard Bennekou; Bruno Hubesch; Hennicke Kamp; Jaffar Kisitu; Nicole Kleinstreuer; Simona Kovarich; Marcel Leist; Alexandra Maertens; Kerry Nugent; Giorgia Pallocca; Manuel Pastor; Grace Patlewicz; Manuela Pavan; Octavio Presgrave; Lena Smirnova; Michael Schwarz; Takashi Yamada; Thomas Hartung
Journal:  ALTEX       Date:  2020-04-30       Impact factor: 6.250

Review 5.  The Role of Omics in the Application of Adverse Outcome Pathways for Chemical Risk Assessment.

Authors:  Erica K Brockmeier; Geoff Hodges; Thomas H Hutchinson; Emma Butler; Markus Hecker; Knut Erik Tollefsen; Natalia Garcia-Reyero; Peter Kille; Dörthe Becker; Kevin Chipman; John Colbourne; Timothy W Collette; Andrew Cossins; Mark Cronin; Peter Graystock; Steve Gutsell; Dries Knapen; Ioanna Katsiadaki; Anke Lange; Stuart Marshall; Stewart F Owen; Edward J Perkins; Stewart Plaistow; Anthony Schroeder; Daisy Taylor; Mark Viant; Gerald Ankley; Francesco Falciani
Journal:  Toxicol Sci       Date:  2017-08-01       Impact factor: 4.849

Review 6.  Use cases, best practice and reporting standards for metabolomics in regulatory toxicology.

Authors:  Mark R Viant; Timothy M D Ebbels; Richard D Beger; Drew R Ekman; David J T Epps; Hennicke Kamp; Pim E G Leonards; George D Loizou; James I MacRae; Bennard van Ravenzwaay; Philippe Rocca-Serra; Reza M Salek; Tilmann Walk; Ralf J M Weber
Journal:  Nat Commun       Date:  2019-07-10       Impact factor: 17.694

7.  KnowTox: pipeline and case study for confident prediction of potential toxic effects of compounds in early phases of development.

Authors:  Andrea Morger; Miriam Mathea; Janosch H Achenbach; Antje Wolf; Roland Buesen; Klaus-Juergen Schleifer; Robert Landsiedel; Andrea Volkamer
Journal:  J Cheminform       Date:  2020-04-14       Impact factor: 5.514

8.  Integrating in vitro metabolomics with a 96-well high-throughput screening platform.

Authors:  Julia M Malinowska; Taina Palosaari; Jukka Sund; Donatella Carpi; Mounir Bouhifd; Ralf J M Weber; Maurice Whelan; Mark R Viant
Journal:  Metabolomics       Date:  2022-01-09       Impact factor: 4.290

9.  Metabolomics Discovers Early-Response Metabolic Biomarkers that Can Predict Chronic Reproductive Fitness in Individual Daphnia magna.

Authors:  Nadine S Taylor; Alex Gavin; Mark R Viant
Journal:  Metabolites       Date:  2018-07-23

10.  Commentary: Novel strategies and new tools to curtail the health effects of pesticides.

Authors:  Charles Benbrook; Melissa J Perry; Fiorella Belpoggi; Philip J Landrigan; Michelle Perro; Daniele Mandrioli; Michael N Antoniou; Paul Winchester; Robin Mesnage
Journal:  Environ Health       Date:  2021-08-03       Impact factor: 5.984

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