Literature DB >> 27629639

Proteome complexity and the forces that drive proteome imbalance.

J Wade Harper1, Eric J Bennett2.   

Abstract

The cellular proteome is a complex microcosm of structural and regulatory networks that requires continuous surveillance and modification to meet the dynamic needs of the cell. It is therefore crucial that the protein flux of the cell remains in balance to ensure proper cell function. Genetic alterations that range from chromosome imbalance to oncogene activation can affect the speed, fidelity and capacity of protein biogenesis and degradation systems, which often results in proteome imbalance. An improved understanding of the causes and consequences of proteome imbalance is helping to reveal how these systems can be targeted to treat diseases such as cancer.

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Year:  2016        PMID: 27629639      PMCID: PMC5204264          DOI: 10.1038/nature19947

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  136 in total

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Journal:  Mol Cell Biol       Date:  1990-10       Impact factor: 4.272

Review 2.  Advances in the clinical development of heat shock protein 90 (Hsp90) inhibitors in cancers.

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Journal:  Biochim Biophys Acta       Date:  2011-10-29

Review 3.  Mutational analysis of the ribosome.

Authors:  Kathleen L Triman
Journal:  Adv Genet       Date:  2007       Impact factor: 1.944

4.  Quality control of a cytoplasmic protein complex: chaperone motors and the ubiquitin-proteasome system govern the fate of orphan fatty acid synthase subunit Fas2 of yeast.

Authors:  Mario Scazzari; Ingo Amm; Dieter H Wolf
Journal:  J Biol Chem       Date:  2015-01-06       Impact factor: 5.157

5.  In the absence of ribosomal RNA synthesis, the ribosomal proteins of HeLa cells are synthesized normally and degraded rapidly.

Authors:  J R Warner
Journal:  J Mol Biol       Date:  1977-09-25       Impact factor: 5.469

Review 6.  Lessons from the cancer genome.

Authors:  Levi A Garraway; Eric S Lander
Journal:  Cell       Date:  2013-03-28       Impact factor: 41.582

Review 7.  Design principles of protein biosynthesis-coupled quality control.

Authors:  Monica C Rodrigo-Brenni; Ramanujan S Hegde
Journal:  Dev Cell       Date:  2012-11-13       Impact factor: 12.270

8.  Aneuploid proliferation defects in yeast are not driven by copy number changes of a few dosage-sensitive genes.

Authors:  Megan E Bonney; Hisao Moriya; Angelika Amon
Journal:  Genes Dev       Date:  2015-05-01       Impact factor: 11.361

9.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

Review 10.  Cellular differences in protein synthesis regulate tissue homeostasis.

Authors:  Michael Buszczak; Robert A J Signer; Sean J Morrison
Journal:  Cell       Date:  2014-10-09       Impact factor: 41.582

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  77 in total

Review 1.  A Chemical Biology Approach to the Chaperome in Cancer-HSP90 and Beyond.

Authors:  Tony Taldone; Tai Wang; Anna Rodina; Naga Vara Kishore Pillarsetty; Chander S Digwal; Sahil Sharma; Pengrong Yan; Suhasini Joshi; Piyusha P Pagare; Alexander Bolaender; Gail J Roboz; Monica L Guzman; Gabriela Chiosis
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Review 2.  Adapting to stress - chaperome networks in cancer.

Authors:  Suhasini Joshi; Tai Wang; Thaís L S Araujo; Sahil Sharma; Jeffrey L Brodsky; Gabriela Chiosis
Journal:  Nat Rev Cancer       Date:  2018-09       Impact factor: 60.716

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Journal:  Nucleus       Date:  2017-01-10       Impact factor: 4.197

4.  Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii.

Authors:  Zhifei Li; Qiang Guo; Lvqin Zheng; Yongsheng Ji; Yi-Ting Xie; De-Hua Lai; Zhao-Rong Lun; Xun Suo; Ning Gao
Journal:  Cell Res       Date:  2017-08-15       Impact factor: 25.617

Review 5.  Proteomic and interactomic insights into the molecular basis of cell functional diversity.

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6.  Single-molecule peptide fingerprinting.

Authors:  Jetty van Ginkel; Mike Filius; Malwina Szczepaniak; Pawel Tulinski; Anne S Meyer; Chirlmin Joo
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Review 7.  Chemical biology approaches for studying posttranslational modifications.

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Journal:  RNA Biol       Date:  2017-09-21       Impact factor: 4.652

Review 8.  Ribosome Abundance Control Via the Ubiquitin-Proteasome System and Autophagy.

Authors:  Heeseon An; J Wade Harper
Journal:  J Mol Biol       Date:  2019-06-11       Impact factor: 5.469

9.  The VCP-UBXN1 Complex Mediates Triage of Ubiquitylated Cytosolic Proteins Bound to the BAG6 Complex.

Authors:  Rakesh Ganji; Sirisha Mukkavalli; Flavio Somanji; Malavika Raman
Journal:  Mol Cell Biol       Date:  2018-06-14       Impact factor: 4.272

10.  Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry.

Authors:  Jean-Benoît Lalanne; James C Taggart; Monica S Guo; Lydia Herzel; Ariel Schieler; Gene-Wei Li
Journal:  Cell       Date:  2018-03-29       Impact factor: 41.582

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