Literature DB >> 27625209

High-throughput sequencing of forensic genetic samples using punches of FTA cards with buccal swabs.

Marie-Louise Kampmann1, Anders Buchard1, Claus Børsting1, Niels Morling1.   

Abstract

Here, we demonstrate that punches from buccal swab samples preserved on FTA cards can be used for high-throughput DNA sequencing, also known as massively parallel sequencing (MPS). We typed 44 reference samples with the HID-Ion AmpliSeq Identity Panel using washed 1.2 mm punches from FTA cards with buccal swabs and compared the results with those obtained with DNA extracted using the EZ1 DNA Investigator Kit. Concordant profiles were obtained for all samples. Our protocol includes simple punch, wash, and PCR steps, reducing cost and hands-on time in the laboratory. Furthermore, it facilitates automation of DNA sequencing.

Entities:  

Keywords:  DNA long-term storage; FTA cards; massively parallel sequencing; next-generation sequencing

Mesh:

Substances:

Year:  2016        PMID: 27625209     DOI: 10.2144/000114453

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  7 in total

1.  The importance of forensic storage support: DNA quality from 11-year-old saliva on FTA cards.

Authors:  Beatrice Corradini; Milena Alù; Elena Magnanini; Mathilde Emmanuelle Galinier; Enrico Silingardi
Journal:  Int J Legal Med       Date:  2019-08-28       Impact factor: 2.686

2.  Forensic application and genetic diversity of 21 autosomal STR loci in five major population groups of Pakistan.

Authors:  Muhammad Adnan Shan; Claus Børsting; Niels Morling
Journal:  Int J Legal Med       Date:  2020-09-26       Impact factor: 2.686

3.  Sequencing of human identification markers in an Uyghur population using the MiSeq FGxTM Forensic Genomics System.

Authors:  Halimureti Simayijiang; Niels Morling; Claus Børsting
Journal:  Forensic Sci Res       Date:  2020-09-10

4.  Anthropological analyses of 30 insertion/deletion autosomal markers in five major ethnic groups of Pakistan.

Authors:  Muhammad Adnan Shan; Julie Mechlenborg; Rebecca Røgen; Claus Børsting; Niels Morling
Journal:  Forensic Sci Res       Date:  2021-08-28

5.  Comparison of Two Massively Parallel Sequencing Platforms using 83 Single Nucleotide Polymorphisms for Human Identification.

Authors:  Dame Loveliness T Apaga; Sheila E Dennis; Jazelyn M Salvador; Gayvelline C Calacal; Maria Corazon A De Ungria
Journal:  Sci Rep       Date:  2017-03-24       Impact factor: 4.379

6.  High throughput sequencing of T-cell receptor repertoire using dry blood spots.

Authors:  Shang-Gin Wu; Wenjing Pan; Hongna Liu; Miranda L Byrne-Steele; Brittany Brown; Mollye Depinet; Xiaohong Hou; Jian Han; Song Li
Journal:  J Transl Med       Date:  2019-02-18       Impact factor: 5.531

7.  Quantification of massively parallel sequencing libraries - a comparative study of eight methods.

Authors:  Christian Hussing; Marie-Louise Kampmann; Helle Smidt Mogensen; Claus Børsting; Niels Morling
Journal:  Sci Rep       Date:  2018-01-18       Impact factor: 4.379

  7 in total

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