Literature DB >> 27607553

Evolution and Ecology of Actinobacteria and Their Bioenergy Applications.

Gina R Lewin1,2, Camila Carlos1,2, Marc G Chevrette1,3, Heidi A Horn1, Bradon R McDonald1,2, Robert J Stankey1,2, Brian G Fox2,4, Cameron R Currie1,2.   

Abstract

The ancient phylum Actinobacteria is composed of phylogenetically and physiologically diverse bacteria that help Earth's ecosystems function. As free-living organisms and symbionts of herbivorous animals, Actinobacteria contribute to the global carbon cycle through the breakdown of plant biomass. In addition, they mediate community dynamics as producers of small molecules with diverse biological activities. Together, the evolution of high cellulolytic ability and diverse chemistry, shaped by their ecological roles in nature, make Actinobacteria a promising group for the bioenergy industry. Specifically, their enzymes can contribute to industrial-scale breakdown of cellulosic plant biomass into simple sugars that can then be converted into biofuels. Furthermore, harnessing their ability to biosynthesize a range of small molecules has potential for the production of specialty biofuels.

Entities:  

Keywords:  Streptomyces; actinomycetes; biofuels; biotechnology; cellulases; symbiosis

Mesh:

Substances:

Year:  2016        PMID: 27607553      PMCID: PMC5703056          DOI: 10.1146/annurev-micro-102215-095748

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  137 in total

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Review 2.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

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Authors:  A J McCarthy; S T Williams
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4.  Actinobacteria as mutualists: general healthcare for insects?

Authors:  Martin Kaltenpoth
Journal:  Trends Microbiol       Date:  2009-10-21       Impact factor: 17.079

Review 5.  Defensive symbioses of animals with prokaryotic and eukaryotic microorganisms.

Authors:  Laura V Flórez; Peter H W Biedermann; Tobias Engl; Martin Kaltenpoth
Journal:  Nat Prod Rep       Date:  2015-07       Impact factor: 13.423

6.  Metatranscriptomic analysis of arctic peat soil microbiota.

Authors:  Alexander T Tveit; Tim Urich; Mette M Svenning
Journal:  Appl Environ Microbiol       Date:  2014-07-11       Impact factor: 4.792

7.  Phylogenetic analysis of mutualistic filamentous bacteria associated with fungus-growing ants.

Authors:  Matías J Cafaro; Cameron R Currie
Journal:  Can J Microbiol       Date:  2005-06       Impact factor: 2.419

Review 8.  Streptomyces as symbionts: an emerging and widespread theme?

Authors:  Ryan F Seipke; Martin Kaltenpoth; Matthew I Hutchings
Journal:  FEMS Microbiol Rev       Date:  2011-12-02       Impact factor: 16.408

9.  Cellulolytic activity of Thermomonospora curvata: nutritional requirments for cellulase production.

Authors:  F J Stutzenberger
Journal:  Appl Microbiol       Date:  1972-07

10.  Defining the core Arabidopsis thaliana root microbiome.

Authors:  Derek S Lundberg; Sarah L Lebeis; Sur Herrera Paredes; Scott Yourstone; Jase Gehring; Stephanie Malfatti; Julien Tremblay; Anna Engelbrektson; Victor Kunin; Tijana Glavina Del Rio; Robert C Edgar; Thilo Eickhorst; Ruth E Ley; Philip Hugenholtz; Susannah Green Tringe; Jeffery L Dangl
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

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  64 in total

Review 1.  Emerging evolutionary paradigms in antibiotic discovery.

Authors:  Marc G Chevrette; Cameron R Currie
Journal:  J Ind Microbiol Biotechnol       Date:  2018-09-29       Impact factor: 3.346

2.  The copper-deprivation stimulon of Corynebacterium glutamicum comprises proteins for biogenesis of the actinobacterial cytochrome bc 1-aa 3 supercomplex.

Authors:  Xenia Morosov; Cedric-Farhad Davoudi; Meike Baumgart; Melanie Brocker; Michael Bott
Journal:  J Biol Chem       Date:  2018-08-28       Impact factor: 5.157

3.  Construction of a new integrating vector from actinophage ϕOZJ and its use in multiplex Streptomyces transformation.

Authors:  Bryan Ko; John D'Alessandro; Lee Douangkeomany; Spencer Stumpf; Ashby deButts; Joshua Blodgett
Journal:  J Ind Microbiol Biotechnol       Date:  2019-11-08       Impact factor: 3.346

4.  Exploring the diversity of mechanosensitive channels in bacterial genomes.

Authors:  Sarah C Johnson; Jordyn Veres; Hannah R Malcolm
Journal:  Eur Biophys J       Date:  2020-11-26       Impact factor: 1.733

5.  Comparative Metagenomics Reveals Enhanced Nutrient Cycling Potential after 2 Years of Biochar Amendment in a Tropical Oxisol.

Authors:  Julian Yu; Lauren M Deem; Susan E Crow; Jonathan Deenik; C Ryan Penton
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

6.  Actinobacteria challenge the paradigm: A unique protein architecture for a well-known, central metabolic complex.

Authors:  Eduardo M Bruch; Pierre Vilela; Lu Yang; Alexandra Boyko; Norik Lexa-Sapart; Bertrand Raynal; Pedro M Alzari; Marco Bellinzoni
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-30       Impact factor: 11.205

7.  Proteomic Characterization of Lignocellulolytic Enzymes Secreted by the Insect-Associated Fungus Daldinia decipiens oita, Isolated from a Forest in Northern Japan.

Authors:  Chiaki Hori; Ruopu Song; Kazuki Matsumoto; Ruy Matsumoto; Benjamin B Minkoff; Shuzo Oita; Hideho Hara; Taichi E Takasuka
Journal:  Appl Environ Microbiol       Date:  2020-04-01       Impact factor: 4.792

8.  Mannose- and Mannobiose-Specific Responses of the Insect-Associated Cellulolytic Bacterium Streptomyces sp. Strain SirexAA-E.

Authors:  Keisuke Ohashi; Shogo Hataya; Akane Nakata; Kazuki Matsumoto; Natsumi Kato; Wakana Sato; Camila Carlos-Shanley; Emily T Beebe; Cameron R Currie; Brian G Fox; Taichi E Takasuka
Journal:  Appl Environ Microbiol       Date:  2021-06-25       Impact factor: 4.792

9.  SANDPUMA: ensemble predictions of nonribosomal peptide chemistry reveal biosynthetic diversity across Actinobacteria.

Authors:  Marc G Chevrette; Fabian Aicheler; Oliver Kohlbacher; Cameron R Currie; Marnix H Medema
Journal:  Bioinformatics       Date:  2017-10-15       Impact factor: 6.937

10.  A New Ciboria sp. for Soil Mycoremediation and the Bacterial Contribution to the Depletion of Total Petroleum Hydrocarbons.

Authors:  Simone Becarelli; Ilaria Chicca; Salvatore La China; Giovanna Siracusa; Alessandra Bardi; Maria Gullo; Giulio Petroni; David Bernard Levin; Simona Di Gregorio
Journal:  Front Microbiol       Date:  2021-06-08       Impact factor: 5.640

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