Literature DB >> 27599198

RNA-Based Coacervates as a Model for Membraneless Organelles: Formation, Properties, and Interfacial Liposome Assembly.

William M Aumiller1, Fatma Pir Cakmak1, Bradley W Davis1, Christine D Keating1.   

Abstract

Liquid-liquid phase separation is responsible for formation of P granules, nucleoli, and other membraneless subcellular organelles composed of RNA and proteins. Efforts to understand the physical basis of liquid organelle formation have thus far focused on intrinsically disordered proteins (IDPs) as major components that dictate occurrence and properties. Here, we show that complex coacervates composed of low complexity RNA (polyuridylic acid, polyU) and short polyamines (spermine and spermidine) share many features of IDP-based coacervates. PolyU/polyamine coacervates compartmentalize biomolecules (peptides, oligonucleotides) in a sequence- and length-dependent manner. These solutes retain mobility within the coacervate droplets, as demonstrated by rapid recovery from photobleaching. Coacervation is reversible with changes in solution temperature due to changes in the polyU structure that impact its interactions with polyamines. We further demonstrate that lipid vesicles assemble at the droplet interface without impeding RNA entry/egress. These vesicles remain intact at the interface and can be released upon temperature-induced droplet dissolution.

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Year:  2016        PMID: 27599198     DOI: 10.1021/acs.langmuir.6b02499

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  69 in total

1.  Synthetic quorum sensing in model microcapsule colonies.

Authors:  Henry Shum; Anna C Balazs
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

2.  Liquid-liquid phase separation in artificial cells.

Authors:  Charles D Crowe; Christine D Keating
Journal:  Interface Focus       Date:  2018-08-17       Impact factor: 3.906

Review 3.  Protocells and RNA Self-Replication.

Authors:  Gerald F Joyce; Jack W Szostak
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-09-04       Impact factor: 10.005

Review 4.  Biomolecular Condensates in the Nucleus.

Authors:  Benjamin R Sabari; Alessandra Dall'Agnese; Richard A Young
Journal:  Trends Biochem Sci       Date:  2020-07-17       Impact factor: 13.807

5.  Physical Principles and Extant Biology Reveal Roles for RNA-Containing Membraneless Compartments in Origins of Life Chemistry.

Authors:  Raghav R Poudyal; Fatma Pir Cakmak; Christine D Keating; Philip C Bevilacqua
Journal:  Biochemistry       Date:  2018-03-21       Impact factor: 3.162

6.  Quantifying Dynamics in Phase-Separated Condensates Using Fluorescence Recovery after Photobleaching.

Authors:  Nicole O Taylor; Ming-Tzo Wei; Howard A Stone; Clifford P Brangwynne
Journal:  Biophys J       Date:  2019-08-30       Impact factor: 4.033

7.  Reentrant Phase Transition Drives Dynamic Substructure Formation in Ribonucleoprotein Droplets.

Authors:  Priya R Banerjee; Anthony N Milin; Mahdi Muhammad Moosa; Paulo L Onuchic; Ashok A Deniz
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-27       Impact factor: 15.336

8.  Lipid Vesicle-Coated Complex Coacervates.

Authors:  Fatma Pir Cakmak; Alex T Grigas; Christine D Keating
Journal:  Langmuir       Date:  2019-05-24       Impact factor: 3.882

Review 9.  RNA Droplets.

Authors:  Kevin Rhine; Velinda Vidaurre; Sua Myong
Journal:  Annu Rev Biophys       Date:  2020-02-10       Impact factor: 12.981

10.  Simple peptide coacervates adapted for rapid pressure-sensitive wet adhesion.

Authors:  Ilia Kaminker; Wei Wei; Alex M Schrader; Yeshayahu Talmon; Megan T Valentine; Jacob N Israelachvili; J Herbert Waite; Songi Han
Journal:  Soft Matter       Date:  2017-12-13       Impact factor: 3.679

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