Literature DB >> 27575591

Identification of Pyridine Synthase Recognition Sequences Allows a Modular Solid-Phase Route to Thiopeptide Variants.

Walter J Wever1, Jonathan W Bogart1, Albert A Bowers1.   

Abstract

Thiopeptides are structurally complex, bioactive natural products derived from ribosomally synthesized and post-translationally modified peptides. A remarkable set of enzymes were recently revealed to catalyze the formation of the core trithiazolylpyridine of thiopeptides via a formal [4 + 2] cycloaddition. These pyridine synthases typically act late in thiopeptide biosynthesis to affect macrocyclization and cleavage of the N-terminal leader peptide, making them potentially useful biocatalysts for preparation of new thiopeptide variants. Herein we investigate the leader peptide requirements for TclM from thiocillin biosynthesis in Bacillus cereus ATCC 14579. Through a series of truncations, we define a minimum recognition sequence (RS) that is necessary and sufficient for TclM activity. This RS can be readily synthesized and ligated to linear thiopeptide cores prepared via solid-phase peptide synthesis (SPPS), giving an efficient and modular route to thiopeptide variants. We exploit this strategy to define C-terminal core peptide requirements and explore the differences in promiscuity of two pyridine synthases, TclM and TbtD, ultimately examining their ability to access new structural variants.

Entities:  

Year:  2016        PMID: 27575591     DOI: 10.1021/jacs.6b05389

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

Review 1.  Elucidating and engineering thiopeptide biosynthesis.

Authors:  Philip R Bennallack; Joel S Griffitts
Journal:  World J Microbiol Biotechnol       Date:  2017-05-11       Impact factor: 3.312

2.  Exploring the Post-translational Enzymology of PaaA by mRNA Display.

Authors:  Steven R Fleming; Paul M Himes; Swapnil V Ghodge; Yuki Goto; Hiroaki Suga; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2020-03-06       Impact factor: 15.419

Review 3.  Recent Advances in Enzymatic Complexity Generation: Cyclization Reactions.

Authors:  Christopher T Walsh; Yi Tang
Journal:  Biochemistry       Date:  2017-12-20       Impact factor: 3.162

Review 4.  RiPP antibiotics: biosynthesis and engineering potential.

Authors:  Graham A Hudson; Douglas A Mitchell
Journal:  Curr Opin Microbiol       Date:  2018-03-10       Impact factor: 7.934

5.  Thiopeptide Pyridine Synthase TbtD Catalyzes an Intermolecular Formal Aza-Diels-Alder Reaction.

Authors:  Jonathan W Bogart; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2019-01-22       Impact factor: 15.419

6.  Interception of the Bycroft-Gowland Intermediate in the Enzymatic Macrocyclization of Thiopeptides.

Authors:  Jonathan W Bogart; Nicholas J Kramer; Aneta Turlik; Rachel M Bleich; Daniel S Catlin; Frank C Schroeder; Satish K Nair; R Thomas Williamson; K N Houk; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2020-07-16       Impact factor: 15.419

7.  Accessing Diverse Pyridine-Based Macrocyclic Peptides by a Two-Site Recognition Pathway.

Authors:  Dinh T Nguyen; Tung T Le; Andrew J Rice; Graham A Hudson; Wilfred A van der Donk; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2022-06-17       Impact factor: 16.383

8.  Flexizyme-Enabled Benchtop Biosynthesis of Thiopeptides.

Authors:  Steven R Fleming; Tessa E Bartges; Alexander A Vinogradov; Christine L Kirkpatrick; Yuki Goto; Hiroaki Suga; Leslie M Hicks; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2019-01-08       Impact factor: 15.419

9.  Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.

Authors:  Dillon P Cogan; Graham A Hudson; Zhengan Zhang; Taras V Pogorelov; Wilfred A van der Donk; Douglas A Mitchell; Satish K Nair
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-20       Impact factor: 11.205

Review 10.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

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