Literature DB >> 27566980

Three-Dimensional Digital Template Atlas of the Macaque Brain.

Colin Reveley1, Audrunas Gruslys2, Frank Q Ye3, Daniel Glen4, Jason Samaha1, Brian E Russ5, Ziad Saad4, Anil K Seth1, David A Leopold3,5, Kadharbatcha S Saleem5.   

Abstract

We present a new 3D template atlas of the anatomical subdivisions of the macaque brain, which is based on and aligned to the magnetic resonance imaging (MRI) data set and histological sections of the Saleem and Logothetis atlas. We describe the creation and validation of the atlas that, when registered with macaque structural or functional MRI scans, provides a straightforward means to estimate the boundaries between architectonic areas, either in a 3D volume with different planes of sections, or on an inflated brain surface (cortical flat map). As such, this new template atlas is intended for use as a reference standard for macaque brain research. Atlases and templates are available as both volumes and surfaces in standard NIFTI and GIFTI formats. Published by Oxford University Press 2016.

Keywords:  3D digital atlas; AFNI and SUMA; anatomical templates; architectonic areas; macaque monkey

Mesh:

Year:  2017        PMID: 27566980      PMCID: PMC6075609          DOI: 10.1093/cercor/bhw248

Source DB:  PubMed          Journal:  Cereb Cortex        ISSN: 1047-3211            Impact factor:   5.357


  29 in total

1.  Cortical parcellations of the macaque monkey analyzed on surface-based atlases.

Authors:  David C Van Essen; Matthew F Glasser; Donna L Dierker; John Harwell
Journal:  Cereb Cortex       Date:  2011-11-02       Impact factor: 5.357

Review 2.  SUMA.

Authors:  Ziad S Saad; Richard C Reynolds
Journal:  Neuroimage       Date:  2011-09-17       Impact factor: 6.556

3.  Internet-enabled high-resolution brain mapping and virtual microscopy.

Authors:  Shawn Mikula; Issac Trotts; James M Stone; Edward G Jones
Journal:  Neuroimage       Date:  2007-01-16       Impact factor: 6.556

4.  Unfolding and flattening the cortex of gyrencephalic brains.

Authors:  J Olavarria; R C Van Sluyters
Journal:  J Neurosci Methods       Date:  1985 Nov-Dec       Impact factor: 2.390

5.  An MRI based average macaque monkey stereotaxic atlas and space (MNI monkey space).

Authors:  Stephen Frey; Deepak N Pandya; M Mallar Chakravarty; Lara Bailey; Michael Petrides; D Louis Collins
Journal:  Neuroimage       Date:  2011-01-20       Impact factor: 6.556

6.  A diffusion tensor MRI atlas of the postmortem rhesus macaque brain.

Authors:  Evan Calabrese; Alexandra Badea; Christopher L Coe; Gabriele R Lubach; Yundi Shi; Martin A Styner; G Allan Johnson
Journal:  Neuroimage       Date:  2015-05-31       Impact factor: 6.556

7.  Neurochemical phenotype of corticocortical connections in the macaque monkey: quantitative analysis of a subset of neurofilament protein-immunoreactive projection neurons in frontal, parietal, temporal, and cingulate cortices.

Authors:  P R Hof; E A Nimchinsky; J H Morrison
Journal:  J Comp Neurol       Date:  1995-11-06       Impact factor: 3.215

8.  Two methods for flat-mounting cortical tissue.

Authors:  R B Tootell; M S Silverman
Journal:  J Neurosci Methods       Date:  1985 Nov-Dec       Impact factor: 2.390

9.  Patches of face-selective cortex in the macaque frontal lobe.

Authors:  Doris Y Tsao; Nicole Schweers; Sebastian Moeller; Winrich A Freiwald
Journal:  Nat Neurosci       Date:  2008-07-11       Impact factor: 24.884

10.  Faces and objects in macaque cerebral cortex.

Authors:  Doris Y Tsao; Winrich A Freiwald; Tamara A Knutsen; Joseph B Mandeville; Roger B H Tootell
Journal:  Nat Neurosci       Date:  2003-09       Impact factor: 24.884

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  64 in total

1.  Comparative modeling of transcranial magnetic and electric stimulation in mouse, monkey, and human.

Authors:  Ivan Alekseichuk; Kathleen Mantell; Sina Shirinpour; Alexander Opitz
Journal:  Neuroimage       Date:  2019-03-22       Impact factor: 6.556

2.  Offline impact of transcranial focused ultrasound on cortical activation in primates.

Authors:  Lennart Verhagen; Cécile Gallea; Matthew Fs Rushworth; Pierre Pouget; Jean-François Aubry; Jerome Sallet; Davide Folloni; Charlotte Constans; Daria Ea Jensen; Harry Ahnine; Léa Roumazeilles; Mathieu Santin; Bashir Ahmed; Stéphane Lehericy; Miriam C Klein-Flügge; Kristine Krug; Rogier B Mars
Journal:  Elife       Date:  2019-02-12       Impact factor: 8.140

3.  Laminar Origin of Corticostriatal Projections to the Motor Putamen in the Macaque Brain.

Authors:  Elena Borra; Marianna Rizzo; Marzio Gerbella; Stefano Rozzi; Giuseppe Luppino
Journal:  J Neurosci       Date:  2020-12-29       Impact factor: 6.167

4.  Prefrontal Neurons Encode a Solution to the Credit-Assignment Problem.

Authors:  Wael F Asaad; Peter M Lauro; János A Perge; Emad N Eskandar
Journal:  J Neurosci       Date:  2017-06-20       Impact factor: 6.167

5.  A map of object space in primate inferotemporal cortex.

Authors:  Pinglei Bao; Liang She; Mason McGill; Doris Y Tsao
Journal:  Nature       Date:  2020-06-03       Impact factor: 49.962

6.  A Dynamic Interplay within the Frontoparietal Network Underlies Rhythmic Spatial Attention.

Authors:  Ian C Fiebelkorn; Mark A Pinsk; Sabine Kastner
Journal:  Neuron       Date:  2018-08-22       Impact factor: 17.173

Review 7.  Parcellating Cerebral Cortex: How Invasive Animal Studies Inform Noninvasive Mapmaking in Humans.

Authors:  David C Van Essen; Matthew F Glasser
Journal:  Neuron       Date:  2018-08-22       Impact factor: 17.173

Review 8.  Development and Evolution of Cerebral and Cerebellar Cortex.

Authors:  David C Van Essen; Chad J Donahue; Matthew F Glasser
Journal:  Brain Behav Evol       Date:  2018-08-10       Impact factor: 1.808

9.  Distinct fMRI Responses to Self-Induced versus Stimulus Motion during Free Viewing in the Macaque.

Authors:  Brian E Russ; Takaaki Kaneko; Kadharbatcha S Saleem; Rebecca A Berman; David A Leopold
Journal:  J Neurosci       Date:  2016-09-14       Impact factor: 6.167

10.  The Basal Forebrain Regulates Global Resting-State fMRI Fluctuations.

Authors:  Janita Turchi; Catie Chang; Frank Q Ye; Brian E Russ; David K Yu; Carlos R Cortes; Ilya E Monosov; Jeff H Duyn; David A Leopold
Journal:  Neuron       Date:  2018-02-01       Impact factor: 17.173

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