Literature DB >> 27562163

Highly photostable, reversibly photoswitchable fluorescent protein with high contrast ratio for live-cell superresolution microscopy.

Xi Zhang1, Mingshu Zhang2, Dong Li3, Wenting He4, Jianxin Peng5, Eric Betzig6, Pingyong Xu7.   

Abstract

Two long-standing problems for superresolution (SR) fluorescence microscopy are high illumination intensity and long acquisition time, which significantly hamper its application for live-cell imaging. Reversibly photoswitchable fluorescent proteins (RSFPs) have made it possible to dramatically lower the illumination intensities in saturated depletion-based SR techniques, such as saturated depletion nonlinear structured illumination microscopy (NL-SIM) and reversible saturable optical fluorescence transition microscopy. The characteristics of RSFPs most critical for SR live-cell imaging include, first, the integrated fluorescence signal across each switching cycle, which depends upon the absorption cross-section, effective quantum yield, and characteristic switching time from the fluorescent "on" to "off" state; second, the fluorescence contrast ratio of on/off states; and third, the photostability under excitation and depletion. Up to now, the RSFPs of the Dronpa and rsEGFP (reversibly switchable EGFP) families have been exploited for SR imaging. However, their limited number of switching cycles, relatively low fluorescence signal, and poor contrast ratio under physiological conditions ultimately restrict their utility in time-lapse live-cell imaging and their ability to reach the desired resolution at a reasonable signal-to-noise ratio. Here, we present a truly monomeric RSFP, Skylan-NS, whose properties are optimized for the recently developed patterned activation NL-SIM, which enables low-intensity (∼100 W/cm(2)) live-cell SR imaging at ∼60-nm resolution at subsecond acquisition times for tens of time points over broad field of view.

Keywords:  Skylan-NS; fluorescent protein; live-cell imaging; microscopy; superresolution

Mesh:

Substances:

Year:  2016        PMID: 27562163      PMCID: PMC5027434          DOI: 10.1073/pnas.1611038113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Saturated patterned excitation microscopy with two-dimensional excitation patterns.

Authors:  Rainer Heintzmann
Journal:  Micron       Date:  2003       Impact factor: 2.251

2.  Saturated patterned excitation microscopy--a concept for optical resolution improvement.

Authors:  Rainer Heintzmann; Thomas M Jovin; Christoph Cremer
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2002-08       Impact factor: 2.129

3.  Molecular basis of the light-driven switching of the photochromic fluorescent protein Padron.

Authors:  Tanja Brakemann; Gert Weber; Martin Andresen; Gerrit Groenhof; Andre C Stiel; Simon Trowitzsch; Christian Eggeling; Helmut Grubmüller; Stefan W Hell; Markus C Wahl; Stefan Jakobs
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

4.  Structural basis for reversible photoswitching in Dronpa.

Authors:  Martin Andresen; Andre C Stiel; Simon Trowitzsch; Gert Weber; Christian Eggeling; Markus C Wahl; Stefan W Hell; Stefan Jakobs
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-23       Impact factor: 11.205

5.  A unique series of reversibly switchable fluorescent proteins with beneficial properties for various applications.

Authors:  Hao Chang; Mingshu Zhang; Wei Ji; Juanjuan Chen; Yongdeng Zhang; Bei Liu; Jingze Lu; Junlong Zhang; Pingyong Xu; Tao Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-28       Impact factor: 11.205

6.  Characterization and development of photoactivatable fluorescent proteins for single-molecule-based superresolution imaging.

Authors:  Siyuan Wang; Jeffrey R Moffitt; Graham T Dempsey; X Sunney Xie; Xiaowei Zhuang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-27       Impact factor: 11.205

Review 7.  Superresolution imaging of biological systems using photoactivated localization microscopy.

Authors:  Prabuddha Sengupta; Schuyler B van Engelenburg; Jennifer Lippincott-Schwartz
Journal:  Chem Rev       Date:  2014-01-13       Impact factor: 60.622

8.  Photoswitchable fluorescent proteins enable monochromatic multilabel imaging and dual color fluorescence nanoscopy.

Authors:  Martin Andresen; Andre C Stiel; Jonas Fölling; Dirk Wenzel; Andreas Schönle; Alexander Egner; Christian Eggeling; Stefan W Hell; Stefan Jakobs
Journal:  Nat Biotechnol       Date:  2008-09       Impact factor: 54.908

9.  rsEGFP2 enables fast RESOLFT nanoscopy of living cells.

Authors:  Tim Grotjohann; Ilaria Testa; Matthias Reuss; Tanja Brakemann; Christian Eggeling; Stefan W Hell; Stefan Jakobs
Journal:  Elife       Date:  2012-12-31       Impact factor: 8.140

10.  A bright and photostable photoconvertible fluorescent protein.

Authors:  Sean A McKinney; Christopher S Murphy; Kristin L Hazelwood; Michael W Davidson; Loren L Looger
Journal:  Nat Methods       Date:  2009-01-25       Impact factor: 28.547

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  19 in total

Review 1.  Advanced imaging and labelling methods to decipher brain cell organization and function.

Authors:  Daniel Choquet; Matthieu Sainlos; Jean-Baptiste Sibarita
Journal:  Nat Rev Neurosci       Date:  2021-03-12       Impact factor: 34.870

2.  Development of bimolecular fluorescence complementation using rsEGFP2 for detection and super-resolution imaging of protein-protein interactions in live cells.

Authors:  Sheng Wang; Miao Ding; Xuanze Chen; Lei Chang; Yujie Sun
Journal:  Biomed Opt Express       Date:  2017-05-31       Impact factor: 3.732

3.  Out-of-Phase Imaging after Optical Modulation (OPIOM) for Multiplexed Fluorescence Imaging Under Adverse Optical Conditions.

Authors:  Raja Chouket; Ruikang Zhang; Agnès Pellissier-Tanon; Annie Lemarchand; Agathe Espagne; Thomas Le Saux; Ludovic Jullien
Journal:  Methods Mol Biol       Date:  2021

4.  Localization-based super-resolution imaging meets high-content screening.

Authors:  Anne Beghin; Adel Kechkar; Corey Butler; Florian Levet; Marine Cabillic; Olivier Rossier; Gregory Giannone; Rémi Galland; Daniel Choquet; Jean-Baptiste Sibarita
Journal:  Nat Methods       Date:  2017-10-30       Impact factor: 28.547

Review 5.  Photoswitchable Fluorescent Proteins: Mechanisms on Ultrafast Timescales.

Authors:  Longteng Tang; Chong Fang
Journal:  Int J Mol Sci       Date:  2022-06-09       Impact factor: 6.208

Review 6.  Between life and death: strategies to reduce phototoxicity in super-resolution microscopy.

Authors:  Kalina L Tosheva; Yue Yuan; Pedro Matos Pereira; Siân Culley; Ricardo Henriques
Journal:  J Phys D Appl Phys       Date:  2020-02-14       Impact factor: 3.207

7.  Optically Modulated and Optically Activated Delayed Fluorescent Proteins through Dark State Engineering.

Authors:  Baijie Peng; Ryan Dikdan; Shannon E Hill; Athéna C Patterson-Orazem; Raquel L Lieberman; Christoph J Fahrni; Robert M Dickson
Journal:  J Phys Chem B       Date:  2021-05-12       Impact factor: 3.466

8.  Nonlinear Structured Illumination Using a Fluorescent Protein Activating at the Readout Wavelength.

Authors:  Hui-Wen Lu-Walther; Wenya Hou; Martin Kielhorn; Yoshiyuki Arai; Takeharu Nagai; Michael M Kessels; Britta Qualmann; Rainer Heintzmann
Journal:  PLoS One       Date:  2016-10-26       Impact factor: 3.240

Review 9.  Precise long non-coding RNA modulation in visual maintenance and impairment.

Authors:  Peixing Wan; Wenru Su; Yehong Zhuo
Journal:  J Med Genet       Date:  2016-12-21       Impact factor: 6.318

10.  X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.

Authors:  Christopher D M Hutchison; Violeta Cordon-Preciado; Rhodri M L Morgan; Takanori Nakane; Josie Ferreira; Gabriel Dorlhiac; Alvaro Sanchez-Gonzalez; Allan S Johnson; Ann Fitzpatrick; Clyde Fare; Jon P Marangos; Chun Hong Yoon; Mark S Hunter; Daniel P DePonte; Sébastien Boutet; Shigeki Owada; Rie Tanaka; Kensuke Tono; So Iwata; Jasper J van Thor
Journal:  Int J Mol Sci       Date:  2017-09-07       Impact factor: 5.923

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