| Literature DB >> 27556453 |
Jixuan Ma1,2, Xiuqing Cui3,4, Yi Rong5, Yun Zhou6,7, Yanjun Guo8,9, Min Zhou10,11, Lili Xiao12,13, Weihong Chen14,15.
Abstract
LncRNA-ATB (lncRNA was activated by transforming growth factor-β) has been reported to be involved in specific physiological and pathological processes in human diseases, and could serve as biomarkers for cancers. However, the role of lncRNA-ATB in coal workers' pneumoconiosis (CWP) is still unknown. This study aimed to investigate the association between lncRNA-ATB and CWP. Quantitative real-time polymerase chain reaction was performed to detect plasma lncRNA-ATB expression in 137 CWP patients, 72 healthy coal miners and 168 healthy controls. LncRNA-ATB was significantly upregulated in CWP (p < 0.05). Compared with the healthy controls and healthy coal miners, the odds ratios (ORs) (95% confidence interval (CI)) for CWP were 2.57 (1.52-4.33) and 2.17 (1.04-4.53), respectively. LncRNA-ATB was positively associated with transforming growth factor-β1 (TGF-β1) (r = 0.30, p = 0.003) and negative correlated with vital capacity (VC) (r = -0.18, p = 0.033) and forced vital capacity (FVC) (r = -0.18, p = 0.046) in CWP patients. Compared with healthy controls, the area under the curve (AUC) was 0.84, resulting in a 71.17% sensitivity and 88.14% specificity. When compared with healthy coal miners, the AUC was 0.83, the sensitivity and specificity were 70.07% and 86.36%, respectively. LncRNA-ATB expression is commonly increased in CWP and significantly correlates with the TGF-β1 in CWP patients. Furthermore, elevated lncRNA-ATB was associated with CWP risk and may serve as a potential biomarker for CWP.Entities:
Keywords: biomarker; coal workers’ pneumoconiosis (CWP); epithelial-mesenchymal transition (EMT); lncRNA-ATB; long noncoding RNA
Mesh:
Substances:
Year: 2016 PMID: 27556453 PMCID: PMC5000762 DOI: 10.3390/ijms17081367
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Basic characteristics of the study population.
| Variables | Normal Controls ( | Healthy Coal Miners ( | CWP Patients ( | |
|---|---|---|---|---|
| Age (years, mean ± SD) | 58.83 ± 10.63 | 57.69 ± 10.86 | 59.27 ± 7.88 | 0.65 a |
| Age ( | ||||
| <55 | 45 (26.79) | 54 (75.00) | 40 (29.19) | <0.05 b |
| ≥55 | 123 (73.21) | 18 (25.00) | 97 (70.81) | |
| BMI (kg/m2, mean ± SD) | 24.61 ± 3.33 | 25.50 ± 2.88 | 22.36 ± 3.46 #,* | <0.05 a |
| Net year in dust ( | ||||
| ≤30 | / | 62 (86.11) | 90 (65.69) | <0.05 b |
| >30 | / | 10 (13.89) | 47 (34.31) | |
| Smoking status ( | ||||
| Non-smoking | 74 (44.05) | 27 (37.50) | 40 (29.20) | <0.05 b |
| Smoking | 94 (55.95) | 45 (62.50) | 97 (70.80) | |
| Blood pressure systolic (mm Hg, mean ± SD) | 127.86 ± 21.51 | n.d. | 140.20 ± 23.76 | <0.05 d |
| Blood pressure diastolic (mm Hg, mean ± SD) | 82.85 ± 16.67 | n.d. | 76.20 ± 13.06 | <0.05 d |
| FVC (% PRED FVC) | 90.65 (64.90–120.30) | 93.55 (71.40–109.40) | 66.20 (28.20–104.50) #,* | <0.05 c |
| FEV1 (% PRED FEV1) | 97.25 (67.10–95.44) | 98.65 (89.00–111.20) | 62.00 (17.70–108.40) #,* | <0.05 c |
| FEV1/FVC (% PRED) | 80.75 (68.10–86.83) | 83.94 (63.11–97.15) | 74.81 (43.83–98.64) #,* | <0.05 c |
| TGF-β1 (pg/mL) | 303.41 ± 28.38 | 425.64 ± 33.98 # | 569.99 ± 64.13 #,* | <0.05 a |
| Col-3 (ng/mL) | 67.28 ± 7.79 | 70.26 ± 8.17 | 112.15 ± 9.16 #,* | <0.05 a |
| MMP2 (ng/mL) | 142.27 (114.16–172.00) | 166.73 (157.68–183.63) # | 206.32 (186.32–219.16) #,* | <0.05 c |
| MMP9 (ng/mL) | 55.84 (45.03–68.81) | 98.88 (75.03–112.32) # | 123.68 (105.16–143.27) #,* | <0.05 c |
| Col-1 (ng/mL) | 28.65 (26.53–29.53) | 29.90 (27.28–32.25) | 34.15 (31.90.90–36.53) #,* | <0.05 c |
Abbreviations: FVC, forced vital capacity; FEV1, forced expiratory volume in 1 s; % PRED FVC, percent of predicted FVC; % PRED FEV1, percent of predicted FEV1. BMI: body mass index. SD, standard deviation. a Calculated by ANOVA test, pair-wise comparisons calculated by Least significant difference; b Calculated by χ-Squared test; c Calculated by Kruskal–Wallis test; d Calculated by t-test; # Compared with Healthy controls, p < 0.05; * Compared with Healthy coal miners, p < 0.05; n.d., not done.
Figure 1Scatter plots of lncRNA-ATB expressions in different groups. Solid circles, healthy controls; Solid squares, healthy coal miners; Solid triangles, CWP patients. (* p < 0.05).
Odds ratio of coal workers’ pneumoconiosis (CWP) according to the lncRNA-ATB expression.
| Variables | LncRNA-ATB Expression Levels (Fold Change) | Per 1 Log-Unit Increment | |||
|---|---|---|---|---|---|
| First Group <0.7559 | Second Group 0.7559–1.1433 | Third Group >1.1433 | |||
| 26/55 | 39/55 | 72/55 | |||
| 1.00 (referent) | 1.47 (0.79–2.74) | 2.67 (1.49–4.78) | 2.75 (1.69–4.48) | <0.05 | |
| 1.00 (referent) | 1.48 (0.80–2.75) | 2.68 (1.50–4.80) | 2.76 (1.70–4.49) | <0.05 | |
| 1.00 (referent) | 1.43 (0.75–2.74) | 2.34 (1.28–4.30) | 2.56 (1.54–4.27) | <0.05 | |
| 1.00 (referent) | 1.41 (0.73–2.72) | 2.39 (1.29–4.42) | 2.57 (1.52–4.33) | <0.05 | |
| <0.7542 | 0.7542–1.2161 | >1.2161 | |||
| 49/23 | 75/24 | 85/25 | |||
| 1.00 (referent) | 1.77 (0.85–3.70) | 2.25 (1.08–4.68) | 1.82 (1.05–3.17) | <0.05 | |
| 1.00 (referent) | 1.86 (0.84–4.15) | 2.25 (1.02–4.97) | 1.83 (1.01–3.35) | <0.05 | |
| 1.00 (referent) | 1.54 (0.64–3.70) | 1.78 (0.74–4.31) | 1.90 (0.97–3.72) | 0.06 | |
| 1.00 (referent) | 1.47 (0.59–3.65) | 2.05 (0.81–5.19) | 2.25 (1.07–4.71) | <0.05 | |
| 1.00 (referent) | 1.65 (0.65–4.18) | 1.90 (0.74–4.89) | 2.17 (1.04–4.53) | <0.05 | |
Model 1: single factor logistic regression. Model 2: adjusted for age (continuous). Model 3: adjusted for age (continuous), body mass index (BMI) (continuous). Model 4: adjusted for age (continuous), body mass index (BMI) (continuous), smoking status (no, yes). Model 5: adjusted for age (continuous), body mass index (BMI) (continuous), smoking status (no, yes), net years in dust (continuous). * p-values for the estimated changes by original log-transformed lncRNA-ATB expressions as a continuous variable.
Correlations between lncRNA-ATB and clinical-/biological features in CWP patients †.
| Variables | LncRNA-ATB | TGF-β1 | MMP-2 | MMP-9 | Col-1 | Col-3 | % PRED VC | % PRED FVC | % PRED FEV1 | FEV1/FVC |
|---|---|---|---|---|---|---|---|---|---|---|
| LncRNA-ATB | 1.00 | 0.30 * | 0.07 | −0.03 | 0.09 | 0.02 | −0.18 * | −0.18 * | −0.10 | 0.05 |
| TGF-β1 | 1.00 | −0.04 | 0.09 | 0.18 | −0.06 | 0.47 * | −0.55 * | −0.50 * | −0.30 * | |
| MMP-2 | 1.00 | 0.04 | 0.09 | −0.03 | −0.02 | −0.04 | −0.08 | −0.06 | ||
| MMP-9 | 1.00 | 0.29 | 0.07 | 0.23 * | −0.20 | −0.29 * | −0.31 * | |||
| Col-1 | 1.00 | 0.14 | 0.28 * | −0.25 * | −0.31 * | −0.20 | ||||
| Col-3 | 1.00 | −0.15 | −0.08 | −0.13 | −0.07 | |||||
| % PRED VC | 1.00 | 0.93 * | 0.88 * | 0.47 * | ||||||
| % PRED FVC | 1.00 | 0.90* | 0.42 * | |||||||
| % PRED FEV1 | 1.00 | 0.75 * | ||||||||
| FEV1/FVC | 1.00 |
Abbreviations: VC, vital capacity; FVC, forced vital capacity; FEV1, forced expiratory volume in 1 s; % PRED VC, percent of predicted VC; % PRED FVC, percent of predicted FVC; % PRED FEV1, percent of predicted FEV1; † Adjusted for age (continuous), body mass index (BMI) (continuous), smoking status (no, yes), net years in dust (continuous); * p < 0.05.
Figure 2Receiver operating characteristic (ROC) curve analysis for lncRNA-ATB in plasma adjusted for risk factors; (a) Compared with healthy controls; and (b) compared with healthy coal miners.