Literature DB >> 27530345

Single dish gradient screening of small molecule localization.

Paolo Beuzer1, Joshua Axelrod, Lynnie Trzoss, Willam Fenical, Ramesh Dasari, Antonio Evidente, Alexander Kornienko, Hu Cang, James J La Clair.   

Abstract

Understanding trafficking in cells and tissues is one of the most critical steps in exploring the mechanisms and modes of action (MOAs) of a small molecule. Typically, deciphering the role of concentration presents one of the most difficult challenges associated with this task. Herein, we present a practical solution to this problem by developing concentration gradients within single dishes of cells. We demonstrate the method by evaluating fluorescently-labelled probes developed from two classes of natural products that have been identified as potential anti-cancer leads by STORM super-resolution microscopy.

Entities:  

Year:  2016        PMID: 27530345      PMCID: PMC5284121          DOI: 10.1039/c6ob01418f

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  40 in total

1.  An optimized immunoaffinity fluorescent method for natural product target elucidation.

Authors:  Wei-Luen Yu; Gianni Guizzunti; Timothy L Foley; Michael D Burkart; James J La Clair
Journal:  J Nat Prod       Date:  2010-09-13       Impact factor: 4.050

Review 2.  Superresolution microscopy with transient binding.

Authors:  Julia Molle; Mario Raab; Susanne Holzmeister; Daniel Schmitt-Monreal; Dina Grohmann; Zhike He; Philip Tinnefeld
Journal:  Curr Opin Biotechnol       Date:  2016-01-12       Impact factor: 9.740

Review 3.  Strategies for target identification of antimicrobial natural products.

Authors:  Maya A Farha; Eric D Brown
Journal:  Nat Prod Rep       Date:  2016-05-04       Impact factor: 13.423

Review 4.  Ultra-stable organic fluorophores for single-molecule research.

Authors:  Qinsi Zheng; Manuel F Juette; Steffen Jockusch; Michael R Wasserman; Zhou Zhou; Roger B Altman; Scott C Blanchard
Journal:  Chem Soc Rev       Date:  2014-02-21       Impact factor: 54.564

5.  Herbicidal potential of ophiobolins produced by Drechslera gigantea.

Authors:  Antonio Evidente; Anna Andolfi; Alessio Cimmino; Maurizio Vurro; Mariano Fracchiolla; Raghavan Charudattan
Journal:  J Agric Food Chem       Date:  2006-03-08       Impact factor: 5.279

6.  The Hybrid Pyrroloisoindolone-Dehydropyrrolizine Alkaloid (-)-Chlorizidine A Targets Proteins within the Glycolytic Pathway.

Authors:  Xavier Álvarez-Micó; Danilo D Rocha; Larissa A Guimarães; Andrew Ambrose; Eli Chapman; Leticia V Costa-Lotufo; James J La Clair; William Fenical
Journal:  Chembiochem       Date:  2015-08-12       Impact factor: 3.164

7.  Ophiobolin A induces paraptosis-like cell death in human glioblastoma cells by decreasing BKCa channel activity.

Authors:  M Bury; A Girault; V Mégalizzi; S Spiegl-Kreinecker; V Mathieu; W Berger; A Evidente; A Kornienko; P Gailly; C Vandier; R Kiss
Journal:  Cell Death Dis       Date:  2013-03-28       Impact factor: 8.469

8.  High-performance probes for light and electron microscopy.

Authors:  Sarada Viswanathan; Megan E Williams; Erik B Bloss; Timothy J Stasevich; Colenso M Speer; Aljoscha Nern; Barret D Pfeiffer; Bryan M Hooks; Wei-Ping Li; Brian P English; Teresa Tian; Gilbert L Henry; John J Macklin; Ronak Patel; Charles R Gerfen; Xiaowei Zhuang; Yalin Wang; Gerald M Rubin; Loren L Looger
Journal:  Nat Methods       Date:  2015-04-27       Impact factor: 28.547

9.  Targeting cell migration and the endoplasmic reticulum stress response with calmodulin antagonists: a clinically tested small molecule phenocopy of SEC62 gene silencing in human tumor cells.

Authors:  Maximilian Linxweiler; Stefan Schorr; Nico Schäuble; Martin Jung; Johannes Linxweiler; Frank Langer; Hans-Joachim Schäfers; Adolfo Cavalié; Richard Zimmermann; Markus Greiner
Journal:  BMC Cancer       Date:  2013-12-05       Impact factor: 4.430

10.  Small-molecule labeling of live cell surfaces for three-dimensional super-resolution microscopy.

Authors:  Marissa K Lee; Prabin Rai; Jarrod Williams; Robert J Twieg; W E Moerner
Journal:  J Am Chem Soc       Date:  2014-09-24       Impact factor: 15.419

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  2 in total

Review 1.  Covalent modification of biological targets with natural products through Paal-Knorr pyrrole formation.

Authors:  Alexander Kornienko; James J La Clair
Journal:  Nat Prod Rep       Date:  2017-08-30       Impact factor: 13.423

Review 2.  Harnessing the Power of Optical Microscopic and Macroscopic Imaging for Natural Products as Cancer Therapeutics.

Authors:  Tianyu Yan; Qi Zeng; Lin Wang; Nan Wang; Honghao Cao; Xinyi Xu; Xueli Chen
Journal:  Front Pharmacol       Date:  2019-11-28       Impact factor: 5.810

  2 in total

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