Literature DB >> 27529561

Artificial Metalloenzymes Based on the Biotin-Streptavidin Technology: Challenges and Opportunities.

Tillmann Heinisch1, Thomas R Ward1.   

Abstract

The biotin-streptavidin technology offers an attractive means to engineer artificial metalloenzymes (ArMs). Initiated over 50 years ago by Bayer and Wilchek, the biotin-(strept)avidin techonology relies on the exquisite supramolecular affinity of either avidin or streptavidin for biotin. This versatile tool, commonly referred to as "molecular velcro", allows nearly irreversible anchoring of biotinylated probes within a (strept)avidin host protein. Building upon a visionary publication by Whitesides from 1978, several groups have been exploiting this technology to create artificial metalloenzymes. For this purpose, a biotinylated organometallic catalyst is introduced within (strept)avidin to afford a hybrid catalyst that combines features reminiscent of both enzymes and organometallic catalysts. Importantly, ArMs can be optimized by chemogenetic means. Combining a small collection of biotinylated organometallic catalysts with streptavidin mutants allows generation of significant diversity, thus allowing optimization of the catalytic performance of ArMs. Pursuing this strategy, the following reactions have been implemented: hydrogenation, alcohol oxidation, sulfoxidation, dihydroxylation, allylic alkylation, transfer hydrogenation, Suzuki cross-coupling, C-H activation, and metathesis. In this Account, we summarize our efforts in the latter four reactions. X-ray analysis of various ArMs based on the biotin-streptavidin technology reveals the versatility and commensurability of the biotin-binding vestibule to accommodate and interact with transition states of the scrutinized organometallic transformations. In particular, streptavidin residues at positions 112 and 121 recurrently lie in close proximity to the biotinylated metal cofactor. This observation led us to develop a streamlined 24-well plate streptavidin production and screening platform to optimize the performance of ArMs. To date, most of the efforts in the field of ArMs have focused on the use of purified protein samples. This seriously limits the throughput of the optimization process. With the ultimate goal of complementing natural enzymes in the context of synthetic and chemical biology, we outline the milestones required to ultimately implement ArMs within a cellular environment. Indeed, we believe that ArMs may allow signficant expansion of the natural enzymes' toolbox to access new-to-nature reactivities in vivo. With this ambitious goal in mind, we report on our efforts to (i) activate the biotinylated catalyst precursor upon incorporation within streptavidin, (ii) minimize the effect of the cellular environment on the ArM's performance, and (iii) demonstrate the compatibility of ArMs with natural enzymes in cascade reactions.

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Year:  2016        PMID: 27529561     DOI: 10.1021/acs.accounts.6b00235

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  37 in total

1.  Artificial Metalloproteins Containing Co4O4 Cubane Active Sites.

Authors:  Lisa Olshansky; Raúl Huerta-Lavorie; Andy I Nguyen; Jaicy Vallapurackal; Ariel Furst; T Don Tilley; A S Borovik
Journal:  J Am Chem Soc       Date:  2018-02-13       Impact factor: 15.419

Review 2.  The Metal Drives the Chemistry: Dual Functions of Acireductone Dioxygenase.

Authors:  Aditi R Deshpande; Thomas C Pochapsky; Dagmar Ringe
Journal:  Chem Rev       Date:  2017-07-21       Impact factor: 60.622

3.  Cooperativity of hydrogen bonding network in microsolvated biotin, the ligand of avidin class proteins.

Authors:  Aneta Jezierska; Jarosław Jan Panek
Journal:  J Mol Model       Date:  2019-11-26       Impact factor: 1.810

Review 4.  Design of artificial metalloproteins/metalloenzymes by tuning noncovalent interactions.

Authors:  Shun Hirota; Ying-Wu Lin
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

Review 5.  Site-Selective Functionalization of (sp3 )C-H Bonds Catalyzed by Artificial Metalloenzymes Containing an Iridium-Porphyrin Cofactor.

Authors:  Yang Gu; Sean N Natoli; Zhennan Liu; Douglas S Clark; John F Hartwig
Journal:  Angew Chem Int Ed Engl       Date:  2019-08-21       Impact factor: 15.336

6.  Asymmetric δ-Lactam Synthesis with a Monomeric Streptavidin Artificial Metalloenzyme.

Authors:  Isra S Hassan; Angeline N Ta; Michael W Danneman; Natthawat Semakul; Matthew Burns; Corey H Basch; Vanessa N Dippon; Brian R McNaughton; Tomislav Rovis
Journal:  J Am Chem Soc       Date:  2019-03-13       Impact factor: 15.419

7.  Peroxide Activation Regulated by Hydrogen Bonds within Artificial Cu Proteins.

Authors:  Samuel I Mann; Tillmann Heinisch; Thomas R Ward; A S Borovik
Journal:  J Am Chem Soc       Date:  2017-11-15       Impact factor: 15.419

8.  Bioorthogonal nanozymes: progress towards therapeutic applications.

Authors:  Xianzhi Zhang; Rui Huang; Sanjana Gopalakrishnan; Roberto Cao-Milán; Vincent M Rotello
Journal:  Trends Chem       Date:  2019-03-08

9.  Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases.

Authors:  Kelsey R Miller; Jonathan D Paretsky; Alec H Follmer; Tillmann Heinisch; Kaustuv Mittra; Sheraz Gul; In-Sik Kim; Franklin D Fuller; Alexander Batyuk; Kyle D Sutherlin; Aaron S Brewster; Asmit Bhowmick; Nicholas K Sauter; Jan Kern; Junko Yano; Michael T Green; Thomas R Ward; A S Borovik
Journal:  Inorg Chem       Date:  2020-04-20       Impact factor: 5.165

10.  Coordination chemistry within a protein host: regulation of the secondary coordination sphere.

Authors:  Samuel I Mann; Tillmann Heinisch; Thomas R Ward; A S Borovik
Journal:  Chem Commun (Camb)       Date:  2018-04-26       Impact factor: 6.222

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