| Literature DB >> 27516808 |
Fang Liu1, Wei Cao1, Chao Deng1, Zhaoquan Wu1, Guangyao Zeng1, Yingjun Zhou1.
Abstract
BACKGROUND: Influenza is historically an ancient disease that causes annual epidemics and, at irregular intervals, pandemics. At present, the first-line drugs (oseltamivir and zanamivir) don't seem to be optimistic due to the spontaneously arising and spreading of oseltamivir resistance among influenza virus. Pogostemon cablin (Blanco) Benth. (P. cablin) is an important traditional Chinese medicine herb that has been widely used for treatment on common cold, nausea and fever. In our previous study, we have identified an extract derived from P. cablin as a novel selective neuraminidase (NA) inhibitor.Entities:
Keywords: Neuraminidase (NA) inhibitory activity; Octaketide; Pogostemon cablin (Blanco) Benth.; Polyphenolic glycosides
Year: 2016 PMID: 27516808 PMCID: PMC4980783 DOI: 10.1186/s13065-016-0192-x
Source DB: PubMed Journal: Chem Cent J ISSN: 1752-153X Impact factor: 4.215
Fig. 1Chemical structures of compound 1–22
1H (500 MHz) and 13C (125 MHz) NMR spectral data of compounds 1 and 2
| Position | 1a | 2b | ||
|---|---|---|---|---|
| δC | δH | δC | δH | |
| 1 | 172.75 | 172.08 | ||
| 2 | 38.94 | 3.50 | 38.77 | 3.33 |
| 3 | 135.79 | 135.80 | ||
| 4 | 119.83 | 122.53 | ||
| 5 | 158.30 | 156.88 | ||
| 6 | 101.42 | 6.29, d (4) | 100.86 | 6.49, br s |
| 7 | 159.95 | 159.59 | ||
| 8 | 110.43 | 6.25, d (4) | 112.28 | 6.37, br s |
| 9 | 211.28 | 209.76 | ||
| 10 | 47.23 | 3.40, m | 47.44 | 3.25 |
| 11 | 25.94 | 1.35, m | 25.75 | 1.24, m |
| 12 | 10.91 | 0.90, t | 11.90 | 0.82, t |
| 13 | 14.87 | 1.08, d (8.5) | 15.76 | 0.98, d (6.5) |
| 14-OCH3 | 51.02 | 3.68, s | ||
| Glu-1 | 100.25 | 4.93, d (7.5) | ||
| Glu-2 | 77.54 | 3.31 | ||
| Glu-3 | 77.45 | 3.31 | ||
| Glu-4 | 69.94 | 3.16 | ||
| Glu-5 | 73.82 | 3.19 | ||
| Glu-6 | 61.00 | 3.70 | ||
aMeasured in CD3OD
bMeasured in DMSO-d 6, δ Chemical shifts are given in ppm, J values are in parentheses and reported in Hz
Fig. 2Key HMBCs (→) and 1H-1H COSY (bold) correlations of compound 1–2
Fig. 3The CD curves of compounds 1 and 2
Fig. 4The CD curves of compounds 5 and 6
Fig. 5Process for the separation of compounds 1–22
NA inhibition activity of compounds 1–22
| Compound | IC50 (μ mol/ml) | Compound | IC50 (μ mol/ml) | Compound | IC50 (μ mol/ml) |
|---|---|---|---|---|---|
| 1 | 8.40 ± 1.20 | 9 | 6.08 ± 0.20 | 17 | 4.69 ± 0.29 |
| 2 | 3.87 ± 0.19 | 10 | 6.53 ± 0.38 | 18 | 3.29 ± 0.04 |
| 3 | 11.62 ± 0.48 | 11 | 3.60 ± 0.02 | 19 | 2.74 ± 0.03 |
| 4 | 10.99 ± 1.15 | 12 | 2.99 ± 0.12 | 20 | 2.12 ± 0.04 |
| 5 | 10.93 ± 0.48 | 13 | 7.87 ± 0.13 | 21 | 32.67 ± 4.73 |
| 6 | 19.94 ± 1.95 | 14 | 3.30 ± 0.12 | 22 | 4.70 ± 0.05 |
| 7 | >200 | 15 | 3.64 ± 0.17 | ||
| 8 | 6.32 ± 0.38 | 16 | 2.27 ± 0.09 | Zanamivir | 0.93 ± 0.02 |
Zanamivir was the positive control; each value represents the mean ± SD (n = 3)
NA inhibition activity of fraction 1–7
| Fractions | Inhibition rate % (1 mg/ml, DMSO) |
|---|---|
| 1 | 44.71 ± 1.53 |
| 2 | 35.71 ± 1.15 |
| 3 | 69.70 ± 1.16 |
| 4 | 20.05 ± 1.00 |
| 5 | 26.38 ± 0.58 |
| 6 | 90.69 ± 1.53 |
| 7 | 18.72 ± 0.58 |
Each value represents the mean ± SD (n = 3)
Theoretical prediction of properties of compounds 1, 2, 16, 20 and 22
| Compound | mi log P | TPSA | MW | nON | nOHNH | nviolations | Volume | nrotb |
|---|---|---|---|---|---|---|---|---|
| 1 | 2.49 | 83.83 | 266.29 | 5 | 2 | 0 | 247.15 | 6 |
| 2 | −0.38 | 173.98 | 414.41 | 10 | 6 | 1 | 361.74 | 8 |
| 16 | 1.63 | 144.52 | 360.32 | 8 | 5 | 0 | 303.54 | 7 |
| 20 | −0.45 | 245.29 | 624.59 | 15 | 9 | 3 | 532.50 | 11 |
| 22 | 2.01 | 96.22 | 356.37 | 6 | 3 | 0 | 316.61 | 5 |
mi log P logarithm of compound partition coefficient between n-octanol and water; TPSA topological polar surface area; MW molecular weight; nON number of hydrogen bond acceptors; nOHNH number of hydrogen bond donors; Nrotb number of rotatable bonds
Fig. 6Molecular models of compounds 1 and 2 binding to active site of NA
Fig. 7Detailed view of the docking results of compounds 1 and 2 in the active site of neuraminidase (PDB ID: 2HU4). The Sky blue lines and numbers show the potential hydrogen bonds and bond length. The first one is compound 1, and the second one is compound 2