Literature DB >> 27504770

Nanopore development at Oxford Nanopore.

Clive G Brown1, James Clarke1.   

Abstract

Mesh：

Year:  2016        PMID： 27504770     DOI： 10.1038/nbt.3622

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  10 in total

Review 1.  New technologies for DNA analysis--a review of the READNA Project.

Authors:  Steven McGinn; David Bauer; Thomas Brefort; Liqin Dong; Afaf El-Sagheer; Abdou Elsharawy; Geraint Evans; Elin Falk-Sörqvist; Michael Forster; Simon Fredriksson; Peter Freeman; Camilla Freitag; Joachim Fritzsche; Spencer Gibson; Mats Gullberg; Marta Gut; Simon Heath; Isabelle Heath-Brun; Andrew J Heron; Johannes Hohlbein; Rongqin Ke; Owen Lancaster; Ludovic Le Reste; Giovanni Maglia; Rodolphe Marie; Florence Mauger; Florian Mertes; Marco Mignardi; Lotte Moens; Jelle Oostmeijer; Ruud Out; Jonas Nyvold Pedersen; Fredrik Persson; Vincent Picaud; Dvir Rotem; Nadine Schracke; Jennifer Sengenes; Peer F Stähler; Björn Stade; David Stoddart; Xia Teng; Colin D Veal; Nathalie Zahra; Hagan Bayley; Markus Beier; Tom Brown; Cees Dekker; Björn Ekström; Henrik Flyvbjerg; Andre Franke; Simone Guenther; Achillefs N Kapanidis; Jane Kaye; Anders Kristensen; Hans Lehrach; Jonathan Mangion; Sascha Sauer; Emile Schyns; Jörg Tost; Joop M L M van Helvoort; Pieter J van der Zaag; Jonas O Tegenfeldt; Anthony J Brookes; Kalim Mir; Mats Nilsson; James P Willcocks; Ivo G Gut
Journal:  N Biotechnol       Date:  2015-10-26       Impact factor: 5.079

2.  Single-molecule DNA detection with an engineered MspA protein nanopore.

Authors:  Tom Z Butler; Mikhail Pavlenok; Ian M Derrington; Michael Niederweis; Jens H Gundlach
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-19       Impact factor: 11.205

3.  Continuous base identification for single-molecule nanopore DNA sequencing.

Authors:  James Clarke; Hai-Chen Wu; Lakmal Jayasinghe; Alpesh Patel; Stuart Reid; Hagan Bayley
Journal:  Nat Nanotechnol       Date:  2009-02-22       Impact factor: 39.213

4.  Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase.

Authors:  Elizabeth A Manrao; Ian M Derrington; Andrew H Laszlo; Kyle W Langford; Matthew K Hopper; Nathaniel Gillgren; Mikhail Pavlenok; Michael Niederweis; Jens H Gundlach
Journal:  Nat Biotechnol       Date:  2012-03-25       Impact factor: 54.908

5.  The effects of diffusion on an exonuclease/nanopore-based DNA sequencing engine.

Authors:  Joseph E Reiner; Arvind Balijepalli; Joseph W F Robertson; Bryon S Drown; Daniel L Burden; John J Kasianowicz
Journal:  J Chem Phys       Date:  2012-12-07       Impact factor: 3.488

6.  On 'three decades of nanopore sequencing'.

Authors:  John J Kasianowicz; Sergey M Bezrukov
Journal:  Nat Biotechnol       Date:  2016-05-06       Impact factor: 54.908

Review 7.  Three decades of nanopore sequencing.

Authors:  David Deamer; Mark Akeson; Daniel Branton
Journal:  Nat Biotechnol       Date:  2016-05-06       Impact factor: 54.908

8.  Tailored Polymeric Membranes for Mycobacterium Smegmatis Porin A (MspA) Based Biosensors.

Authors:  Danielle Morton; Shahab Mortezaei; Sukru Yemenicioglu; Michael J Isaacman; Ian C Nova; Jens H Gundlach; Luke Theogarajan
Journal:  J Mater Chem B       Date:  2015-07-07       Impact factor: 6.331

9.  Decoding long nanopore sequencing reads of natural DNA.

Authors:  Andrew H Laszlo; Ian M Derrington; Brian C Ross; Henry Brinkerhoff; Andrew Adey; Ian C Nova; Jonathan M Craig; Kyle W Langford; Jenny Mae Samson; Riza Daza; Kenji Doering; Jay Shendure; Jens H Gundlach
Journal:  Nat Biotechnol       Date:  2014-06-25       Impact factor: 54.908

10.  Subangstrom single-molecule measurements of motor proteins using a nanopore.

Authors:  Ian M Derrington; Jonathan M Craig; Eric Stava; Andrew H Laszlo; Brian C Ross; Henry Brinkerhoff; Ian C Nova; Kenji Doering; Benjamin I Tickman; Mostafa Ronaghi; Jeffrey G Mandell; Kevin L Gunderson; Jens H Gundlach
Journal:  Nat Biotechnol       Date:  2015-09-28       Impact factor: 54.908
  10 in total
  23 in total

Review 1.  High bandwidth approaches in nanopore and ion channel recordings - A tutorial review.

Authors:  Andreas J W Hartel; Siddharth Shekar; Peijie Ong; Indra Schroeder; Gerhard Thiel; Kenneth L Shepard
Journal:  Anal Chim Acta       Date:  2019-01-25       Impact factor: 6.558

2.  Helicase SPRNTing through the nanopore.

Authors:  Colleen C Caldwell; Maria Spies
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-24       Impact factor: 11.205

3.  Colloquium: Ionic phenomena in nanoscale pores through 2D materials.

Authors:  Subin Sahu; Michael Zwolak
Journal:  Rev Mod Phys       Date:  2019       Impact factor: 54.494

4.  Solid-state nanopore fabrication by automated controlled breakdown.

Authors:  Matthew Waugh; Kyle Briggs; Dylan Gunn; Mathieu Gibeault; Simon King; Quinn Ingram; Aura Melissa Jimenez; Samuel Berryman; Dmytro Lomovtsev; Lukasz Andrzejewski; Vincent Tabard-Cossa
Journal:  Nat Protoc       Date:  2019-12-13       Impact factor: 13.491

5.  Ectopic expression of BOTRYTIS SUSCEPTIBLE1 reveals its function as a positive regulator of wound-induced cell death and plant susceptibility to Botrytis.

Authors:  Fuqiang Cui; Xiaoxiao Li; Wenwu Wu; Wenbo Luo; Ying Wu; Mikael Brosché; Kirk Overmyer
Journal:  Plant Cell       Date:  2022-09-27       Impact factor: 12.085

Review 6.  Advanced Nanoscale Approaches to Single-(Bio)entity Sensing and Imaging.

Authors:  Marta Maria Pereira da Silva Neves; Daniel Martín-Yerga
Journal:  Biosensors (Basel)       Date:  2018-10-26

7.  Analysis of short tandem repeat expansions and their methylation state with nanopore sequencing.

Authors:  Pay Giesselmann; Björn Brändl; Etienne Raimondeau; Rebecca Bowen; Christian Rohrandt; Rashmi Tandon; Helene Kretzmer; Günter Assum; Christina Galonska; Reiner Siebert; Ole Ammerpohl; Andrew Heron; Susanne A Schneider; Julia Ladewig; Philipp Koch; Bernhard M Schuldt; James E Graham; Alexander Meissner; Franz-Josef Müller
Journal:  Nat Biotechnol       Date:  2019-11-18       Impact factor: 54.908

8.  MINTyper: an outbreak-detection method for accurate and rapid SNP typing of clonal clusters with noisy long reads.

Authors:  Malte B Hallgren; Søren Overballe-Petersen; Ole Lund; Henrik Hasman; Philip T L C Clausen
Journal:  Biol Methods Protoc       Date:  2021-04-21

9.  Control of subunit stoichiometry in single-chain MspA nanopores.

Authors:  Mikhail Pavlenok; Luning Yu; Dominik Herrmann; Meni Wanunu; Michael Niederweis
Journal:  Biophys J       Date:  2022-01-31       Impact factor: 4.033

10.  High-Fidelity Capture, Threading, and Infinite-Depth Sequencing of Single DNA Molecules with a Double-Nanopore System.

Authors:  Adnan Choudhary; Himanshu Joshi; Han-Yi Chou; Kumar Sarthak; James Wilson; Christopher Maffeo; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2020-11-11       Impact factor: 15.881
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