Literature DB >> 26413301

Tailored Polymeric Membranes for Mycobacterium Smegmatis Porin A (MspA) Based Biosensors.

Danielle Morton1, Shahab Mortezaei1, Sukru Yemenicioglu1, Michael J Isaacman1, Ian C Nova2, Jens H Gundlach2, Luke Theogarajan1.   

Abstract

Nanopores based on protein channels inserted into lipid membranes have paved the way towards a wide-range of inexpensive biosensors, especially for DNA sequencing. A key obstacle in using these biological ion channels as nanodevices is the poor stability of lipid bilayer membranes. Amphiphilic block copolymer membranes have emerged as a robust alternative to lipid membranes. While previous efforts have shown feasibility, we demonstrate for the first time the effect of polymer composition on MspA protein functionality. We show that membrane-protein interaction depends on the hydrophobic-hydrophilic ratio (f-ratio) of the block copolymer. These effects are particularly pronounced in asymmetric protein pores like MspA compared to the cylindrical α-Hemolysin pore. A key effect of membrane-protein interaction is the increased 1/fα noise. After first showing increases in 1/fα behaviour arise from increased substate activity, the noise power spectral density S(f) was used as a qualitative tool for understanding protein-membrane interactions in polymer membranes. Polymer compositions with f-ratios close to lipid membranes caused noise behaviour not observed in lipid membranes. However, by modifying the f-ratio using a modular synthetic approach, we were able to design a block copolymer exhibiting noise properties similar to a lipid membrane, albeit with better stability. Thus, by careful optimization, block copolymer membranes can emerge as a robust alternative for protein-pore based nano-biosensors.

Entities:  

Year:  2015        PMID: 26413301      PMCID: PMC4582436          DOI: 10.1039/C5TB00383K

Source DB:  PubMed          Journal:  J Mater Chem B        ISSN: 2050-750X            Impact factor:   6.331


  20 in total

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Authors:  S M Bezrukov; M Winterhalter
Journal:  Phys Rev Lett       Date:  2000-07-03       Impact factor: 9.161

2.  Open channel structure of MscL and the gating mechanism of mechanosensitive channels.

Authors:  Eduardo Perozo; D Marien Cortes; Pornthep Sompornpisut; Anna Kloda; Boris Martinac
Journal:  Nature       Date:  2002-08-29       Impact factor: 49.962

3.  Origin of 1/f(alpha) noise in membrane channel currents.

Authors:  Z Siwy; A Fuliński
Journal:  Phys Rev Lett       Date:  2002-09-20       Impact factor: 9.161

4.  Forming an alpha-hemolysin nanopore for single-molecule analysis.

Authors:  Nahid N Jetha; Matthew Wiggin; Andre Marziali
Journal:  Methods Mol Biol       Date:  2009

5.  Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase.

Authors:  Elizabeth A Manrao; Ian M Derrington; Andrew H Laszlo; Kyle W Langford; Matthew K Hopper; Nathaniel Gillgren; Mikhail Pavlenok; Michael Niederweis; Jens H Gundlach
Journal:  Nat Biotechnol       Date:  2012-03-25       Impact factor: 54.908

6.  Reconstitution of Channel Proteins in (Polymerized) ABA Triblock Copolymer Membranes This work was supported by the Swiss National Science Foundation. We thank Dr. T. Hirt and Dr. J. Leukel for the synthesis of the triblock copolymer, Dr. P. Van Gelder and Dr. F. Dumas for bright and helpful discussions, and T. Haefele for his contribution to the experimental part.

Authors:  Wolfgang Meier; Corinne Nardin; Mathias Winterhalter
Journal:  Angew Chem Int Ed Engl       Date:  2000-12-15       Impact factor: 15.336

7.  Topology of the porin MspA in the outer membrane of Mycobacterium smegmatis.

Authors:  Maysa Mahfoud; Suja Sukumaran; Peter Hülsmann; Katrin Grieger; Michael Niederweis
Journal:  J Biol Chem       Date:  2005-12-12       Impact factor: 5.157

8.  Determination of the lipid bilayer breakdown voltage by means of linear rising signal.

Authors:  P Kramar; D Miklavcic; A Macek Lebar
Journal:  Bioelectrochemistry       Date:  2006-04-05       Impact factor: 5.373

Review 9.  The potential and challenges of nanopore sequencing.

Authors:  Daniel Branton; David W Deamer; Andre Marziali; Hagan Bayley; Steven A Benner; Thomas Butler; Massimiliano Di Ventra; Slaven Garaj; Andrew Hibbs; Xiaohua Huang; Stevan B Jovanovich; Predrag S Krstic; Stuart Lindsay; Xinsheng Sean Ling; Carlos H Mastrangelo; Amit Meller; John S Oliver; Yuriy V Pershin; J Michael Ramsey; Robert Riehn; Gautam V Soni; Vincent Tabard-Cossa; Meni Wanunu; Matthew Wiggin; Jeffery A Schloss
Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

10.  Clickable Amphiphilic Triblock Copolymers.

Authors:  Michael J Isaacman; Kathryn A Barron; Luke S Theogarajan
Journal:  J Polym Sci A Polym Chem       Date:  2012-06-15       Impact factor: 2.702

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  4 in total

1.  Nanopore development at Oxford Nanopore.

Authors:  Clive G Brown; James Clarke
Journal:  Nat Biotechnol       Date:  2016-08-09       Impact factor: 54.908

2.  Geometrically Induced Selectivity and Unidirectional Electroosmosis in Uncharged Nanopores.

Authors:  Giovanni Di Muccio; Blasco Morozzo Della Rocca; Mauro Chinappi
Journal:  ACS Nano       Date:  2022-05-19       Impact factor: 18.027

3.  Modern venomics-Current insights, novel methods, and future perspectives in biological and applied animal venom research.

Authors:  Bjoern M von Reumont; Gregor Anderluh; Agostinho Antunes; Naira Ayvazyan; Dimitris Beis; Figen Caliskan; Ana Crnković; Maik Damm; Sebastien Dutertre; Lars Ellgaard; Goran Gajski; Hannah German; Beata Halassy; Benjamin-Florian Hempel; Tim Hucho; Nasit Igci; Maria P Ikonomopoulou; Izhar Karbat; Maria I Klapa; Ivan Koludarov; Jeroen Kool; Tim Lüddecke; Riadh Ben Mansour; Maria Vittoria Modica; Yehu Moran; Ayse Nalbantsoy; María Eugenia Pachón Ibáñez; Alexios Panagiotopoulos; Eitan Reuveny; Javier Sánchez Céspedes; Andy Sombke; Joachim M Surm; Eivind A B Undheim; Aida Verdes; Giulia Zancolli
Journal:  Gigascience       Date:  2022-05-18       Impact factor: 7.658

4.  Stable polymer bilayers for protein channel recordings at high guanidinium chloride concentrations.

Authors:  Luning Yu; Xinqi Kang; Mohammad Amin Alibakhshi; Mikhail Pavlenok; Michael Niederweis; Meni Wanunu
Journal:  Biophys J       Date:  2021-02-20       Impact factor: 4.033

  4 in total

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