Literature DB >> 27499294

Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity.

Jonathan A Stefely1, Floriana Licitra2, Leila Laredj2, Andrew G Reidenbach1, Zachary A Kemmerer1, Anais Grangeray3, Tiphaine Jaeg-Ehret2, Catherine E Minogue4, Arne Ulbrich4, Paul D Hutchins4, Emily M Wilkerson4, Zheng Ruan5, Deniz Aydin6, Alexander S Hebert7, Xiao Guo8, Elyse C Freiberger9, Laurence Reutenauer2, Adam Jochem10, Maya Chergova2, Isabel E Johnson1, Danielle C Lohman1, Matthew J P Rush4, Nicholas W Kwiecien4, Pankaj K Singh2, Anna I Schlagowski11, Brendan J Floyd1, Ulrika Forsman12, Pavel J Sindelar13, Michael S Westphall7, Fabien Pierrel14, Joffrey Zoll11, Matteo Dal Peraro6, Natarajan Kannan5, Craig A Bingman9, Joshua J Coon15, Philippe Isope3, Hélène Puccio16, David J Pagliarini17.   

Abstract

The UbiB protein kinase-like (PKL) family is widespread, comprising one-quarter of microbial PKLs and five human homologs, yet its biochemical activities remain obscure. COQ8A (ADCK3) is a mammalian UbiB protein associated with ubiquinone (CoQ) biosynthesis and an ataxia (ARCA2) through unclear means. We show that mice lacking COQ8A develop a slowly progressive cerebellar ataxia linked to Purkinje cell dysfunction and mild exercise intolerance, recapitulating ARCA2. Interspecies biochemical analyses show that COQ8A and yeast Coq8p specifically stabilize a CoQ biosynthesis complex through unorthodox PKL functions. Although COQ8 was predicted to be a protein kinase, we demonstrate that it lacks canonical protein kinase activity in trans. Instead, COQ8 has ATPase activity and interacts with lipid CoQ intermediates, functions that are likely conserved across all domains of life. Collectively, our results lend insight into the molecular activities of the ancient UbiB family and elucidate the biochemical underpinnings of a human disease.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27499294      PMCID: PMC5012427          DOI: 10.1016/j.molcel.2016.06.030

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  53 in total

1.  Ubiquinone.

Authors:  R A MORTON
Journal:  Nature       Date:  1958-12-27       Impact factor: 49.962

2.  Ubiquinone biosynthesis in Saccharomyces cerevisiae: the molecular organization of O-methylase Coq3p depends on Abc1p/Coq8p.

Authors:  Anja Tauche; Udo Krause-Buchholz; Gerhard Rödel
Journal:  FEMS Yeast Res       Date:  2008-09-15       Impact factor: 2.796

3.  Novel families of putative protein kinases in bacteria and archaea: evolution of the "eukaryotic" protein kinase superfamily.

Authors:  C J Leonard; L Aravind; E V Koonin
Journal:  Genome Res       Date:  1998-10       Impact factor: 9.043

4.  Targeted deletion of betaIII spectrin impairs synaptogenesis and generates ataxic and seizure phenotypes.

Authors:  Michael C Stankewich; Babette Gwynn; Thomas Ardito; Lan Ji; Jung Kim; Raymond F Robledo; Samuel E Lux; Luanne L Peters; Jon S Morrow
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

Review 5.  Endogenous synthesis of coenzyme Q in eukaryotes.

Authors:  UyenPhuong C Tran; Catherine F Clarke
Journal:  Mitochondrion       Date:  2007-03-30       Impact factor: 4.160

6.  A mitochondrial protein compendium elucidates complex I disease biology.

Authors:  David J Pagliarini; Sarah E Calvo; Betty Chang; Sunil A Sheth; Scott B Vafai; Shao-En Ong; Geoffrey A Walford; Canny Sugiana; Avihu Boneh; William K Chen; David E Hill; Marc Vidal; James G Evans; David R Thorburn; Steven A Carr; Vamsi K Mootha
Journal:  Cell       Date:  2008-07-11       Impact factor: 41.582

7.  CABC1 gene mutations cause ubiquinone deficiency with cerebellar ataxia and seizures.

Authors:  Julie Mollet; Agnès Delahodde; Valérie Serre; Dominique Chretien; Dimitri Schlemmer; Anne Lombes; Nathalie Boddaert; Isabelle Desguerre; Pascale de Lonlay; Hélène Ogier de Baulny; Arnold Munnich; Agnès Rötig
Journal:  Am J Hum Genet       Date:  2008-03       Impact factor: 11.025

8.  Functional viability profiles of breast cancer.

Authors:  Rachel Brough; Jessica R Frankum; David Sims; Alan Mackay; Ana M Mendes-Pereira; Ilirjana Bajrami; Sara Costa-Cabral; Rumana Rafiq; Amar S Ahmad; Maria Antonietta Cerone; Rachael Natrajan; Rachel Sharpe; Kai-Keen Shiu; Daniel Wetterskog; Konstantine J Dedes; Maryou B Lambros; Teeara Rawjee; Spiros Linardopoulos; Jorge S Reis-Filho; Nicholas C Turner; Christopher J Lord; Alan Ashworth
Journal:  Cancer Discov       Date:  2011-08-02       Impact factor: 39.397

Review 9.  Pseudokinases-remnants of evolution or key allosteric regulators?

Authors:  Elton Zeqiraj; Daan M F van Aalten
Journal:  Curr Opin Struct Biol       Date:  2010-11-10       Impact factor: 6.809

10.  Identification and classification of small molecule kinases: insights into substrate recognition and specificity.

Authors:  Krishnadev Oruganty; Eric E Talevich; Andrew F Neuwald; Natarajan Kannan
Journal:  BMC Evol Biol       Date:  2016-01-06       Impact factor: 3.260

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  33 in total

1.  Primary Coenzyme Q deficiency Due to Novel ADCK3 Variants, Studies in Fibroblasts and Review of Literature.

Authors:  Adel Shalata; Michael Edery; Clair Habib; Jacob Genizi; Mohammad Mahroum; Lama Khalaily; Nurit Assaf; Idan Segal; Hoda Abed El Rahim; Hana Shapira; Danielle Urian; Shay Tzur; Liza Douiev; Ann Saada
Journal:  Neurochem Res       Date:  2019-04-09       Impact factor: 3.996

Review 2.  Pseudoscaffolds and anchoring proteins: the difference is in the details.

Authors:  Stacey Aggarwal-Howarth; John D Scott
Journal:  Biochem Soc Trans       Date:  2017-04-15       Impact factor: 5.407

3.  Mitochondrial CoQ deficiency is a common driver of mitochondrial oxidants and insulin resistance.

Authors:  Roland Stocker; David E James; Daniel J Fazakerley; Rima Chaudhuri; Pengyi Yang; Ghassan J Maghzal; Kristen C Thomas; James R Krycer; Sean J Humphrey; Benjamin L Parker; Kelsey H Fisher-Wellman; Christopher C Meoli; Nolan J Hoffman; Ciana Diskin; James G Burchfield; Mark J Cowley; Warren Kaplan; Zora Modrusan; Ganesh Kolumam; Jean Yh Yang; Daniel L Chen; Dorit Samocha-Bonet; Jerry R Greenfield; Kyle L Hoehn
Journal:  Elife       Date:  2018-02-06       Impact factor: 8.140

4.  Functional analysis of Aarf domain-containing kinase 1 in Drosophila melanogaster.

Authors:  Dona R Wisidagama; Stefan M Thomas; Geanette Lam; Carl S Thummel
Journal:  Dev Dyn       Date:  2019-06-19       Impact factor: 3.780

Review 5.  Biochemistry of Mitochondrial Coenzyme Q Biosynthesis.

Authors:  Jonathan A Stefely; David J Pagliarini
Journal:  Trends Biochem Sci       Date:  2017-09-17       Impact factor: 13.807

6.  Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis.

Authors:  Christopher P Lapointe; Jonathan A Stefely; Adam Jochem; Paul D Hutchins; Gary M Wilson; Nicholas W Kwiecien; Joshua J Coon; Marvin Wickens; David J Pagliarini
Journal:  Cell Syst       Date:  2017-12-13       Impact factor: 10.304

7.  A path to the powerhouse: systems-to-structure approaches for studying mitochondrial proteins.

Authors:  David J Pagliarini
Journal:  Protein Sci       Date:  2018-05-18       Impact factor: 6.725

8.  ADCK4 Deficiency Destabilizes the Coenzyme Q Complex, Which Is Rescued by 2,4-Dihydroxybenzoic Acid Treatment.

Authors:  Eugen Widmeier; Seyoung Yu; Anish Nag; Youn Wook Chung; Makiko Nakayama; Lucía Fernández-Del-Río; Hannah Hugo; David Schapiro; Florian Buerger; Won-Il Choi; Martin Helmstädter; Jae-Woo Kim; Ji-Hwan Ryu; Min Goo Lee; Catherine F Clarke; Friedhelm Hildebrandt; Heon Yung Gee
Journal:  J Am Soc Nephrol       Date:  2020-05-07       Impact factor: 10.121

9.  LipiDex: An Integrated Software Package for High-Confidence Lipid Identification.

Authors:  Paul D Hutchins; Jason D Russell; Joshua J Coon
Journal:  Cell Syst       Date:  2018-04-25       Impact factor: 10.304

10.  Compound Heterozygous Inheritance of Mutations in Coenzyme Q8A Results in Autosomal Recessive Cerebellar Ataxia and Coenzyme Q10 Deficiency in a Female Sib-Pair.

Authors:  Jessie C Jacobsen; Whitney Whitford; Brendan Swan; Juliet Taylor; Donald R Love; Rosamund Hill; Sarah Molyneux; Peter M George; Richard Mackay; Stephen P Robertson; Russell G Snell; Klaus Lehnert
Journal:  JIMD Rep       Date:  2017-11-21
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