Literature DB >> 28927698

Biochemistry of Mitochondrial Coenzyme Q Biosynthesis.

Jonathan A Stefely1, David J Pagliarini2.   

Abstract

Coenzyme Q (CoQ, ubiquinone) is a redox-active lipid produced across all domains of life that functions in electron transport and oxidative phosphorylation and whose deficiency causes human diseases. Yet, CoQ biosynthesis has not been fully defined in any organism. Several proteins with unclear molecular functions facilitate CoQ biosynthesis through unknown means, and multiple steps in the pathway are catalyzed by currently unidentified enzymes. Here we highlight recent progress toward filling these knowledge gaps through both traditional biochemistry and cutting-edge 'omics' approaches. To help fill the remaining gaps, we present questions framed by the recently discovered CoQ biosynthetic complex and by putative biophysical barriers. Mapping CoQ biosynthesis, metabolism, and transport pathways has great potential to enhance treatment of numerous human diseases.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CoQ-synthome; biosynthesis; coenzyme Q; complex Q; lipids; metabolon; mitochondria; mitochondrial disease; oxidative phosphorylation; protein complex; ubiquinone

Mesh:

Substances:

Year:  2017        PMID: 28927698      PMCID: PMC5731490          DOI: 10.1016/j.tibs.2017.06.008

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  175 in total

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Authors:  P T Lee; A Y Hsu; H T Ha; C F Clarke
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

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Authors:  Luis Carlos López; Markus Schuelke; Catarina M Quinzii; Tomotake Kanki; Richard J T Rodenburg; Ali Naini; Salvatore Dimauro; Michio Hirano
Journal:  Am J Hum Genet       Date:  2006-10-27       Impact factor: 11.025

6.  Evolutionary conservation of the clk-1-dependent mechanism of longevity: loss of mclk1 increases cellular fitness and lifespan in mice.

Authors:  Xingxing Liu; Ning Jiang; Bryan Hughes; Eve Bigras; Eric Shoubridge; Siegfried Hekimi
Journal:  Genes Dev       Date:  2005-09-29       Impact factor: 11.361

7.  The UbiK protein is an accessory factor necessary for bacterial ubiquinone (UQ) biosynthesis and forms a complex with the UQ biogenesis factor UbiJ.

Authors:  Laurent Loiseau; Cameron Fyfe; Laurent Aussel; Mahmoud Hajj Chehade; Sara B Hernández; Bruno Faivre; Djemel Hamdane; Caroline Mellot-Draznieks; Bérengère Rascalou; Ludovic Pelosi; Christophe Velours; David Cornu; Murielle Lombard; Josep Casadesús; Fabien Pierrel; Marc Fontecave; Frédéric Barras
Journal:  J Biol Chem       Date:  2017-05-30       Impact factor: 5.157

Review 8.  Endogenous synthesis of coenzyme Q in eukaryotes.

Authors:  UyenPhuong C Tran; Catherine F Clarke
Journal:  Mitochondrion       Date:  2007-03-30       Impact factor: 4.160

9.  A mitochondrial protein compendium elucidates complex I disease biology.

Authors:  David J Pagliarini; Sarah E Calvo; Betty Chang; Sunil A Sheth; Scott B Vafai; Shao-En Ong; Geoffrey A Walford; Canny Sugiana; Avihu Boneh; William K Chen; David E Hill; Marc Vidal; James G Evans; David R Thorburn; Steven A Carr; Vamsi K Mootha
Journal:  Cell       Date:  2008-07-11       Impact factor: 41.582

10.  3-Hexaprenyl-4-hydroxybenzoic acid forms a predominant intermediate pool in ubiquinone biosynthesis in Saccharomyces cerevisiae.

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Journal:  Arch Biochem Biophys       Date:  1995-07-10       Impact factor: 4.013

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  80 in total

1.  PARL deficiency in mouse causes Complex III defects, coenzyme Q depletion, and Leigh-like syndrome.

Authors:  Marco Spinazzi; Enrico Radaelli; Katrien Horré; Amaia M Arranz; Natalia V Gounko; Patrizia Agostinis; Teresa Mendes Maia; Francis Impens; Vanessa Alexandra Morais; Guillermo Lopez-Lluch; Lutgarde Serneels; Placido Navas; Bart De Strooper
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-21       Impact factor: 11.205

2.  Recombinant RquA catalyzes the in vivo conversion of ubiquinone to rhodoquinone in Escherichia coli and Saccharomyces cerevisiae.

Authors:  Ann C Bernert; Evan J Jacobs; Samantha R Reinl; Christina C Y Choi; Paloma M Roberts Buceta; John C Culver; Carly R Goodspeed; Michelle C Bradley; Catherine F Clarke; Gilles J Basset; Jennifer N Shepherd
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2019-05-21       Impact factor: 4.698

3.  Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis.

Authors:  Christopher P Lapointe; Jonathan A Stefely; Adam Jochem; Paul D Hutchins; Gary M Wilson; Nicholas W Kwiecien; Joshua J Coon; Marvin Wickens; David J Pagliarini
Journal:  Cell Syst       Date:  2017-12-13       Impact factor: 10.304

4.  A path to the powerhouse: systems-to-structure approaches for studying mitochondrial proteins.

Authors:  David J Pagliarini
Journal:  Protein Sci       Date:  2018-05-18       Impact factor: 6.725

5.  Omics Integration for Mitochondria Systems Biology.

Authors:  Xin Hu; Young-Mi Go; Dean P Jones
Journal:  Antioxid Redox Signal       Date:  2020-02-03       Impact factor: 8.401

6.  ADCK4 Deficiency Destabilizes the Coenzyme Q Complex, Which Is Rescued by 2,4-Dihydroxybenzoic Acid Treatment.

Authors:  Eugen Widmeier; Seyoung Yu; Anish Nag; Youn Wook Chung; Makiko Nakayama; Lucía Fernández-Del-Río; Hannah Hugo; David Schapiro; Florian Buerger; Won-Il Choi; Martin Helmstädter; Jae-Woo Kim; Ji-Hwan Ryu; Min Goo Lee; Catherine F Clarke; Friedhelm Hildebrandt; Heon Yung Gee
Journal:  J Am Soc Nephrol       Date:  2020-05-07       Impact factor: 10.121

7.  Multi-omic Mitoprotease Profiling Defines a Role for Oct1p in Coenzyme Q Production.

Authors:  Mike T Veling; Andrew G Reidenbach; Elyse C Freiberger; Nicholas W Kwiecien; Paul D Hutchins; Michael J Drahnak; Adam Jochem; Arne Ulbrich; Matthew J P Rush; Jason D Russell; Joshua J Coon; David J Pagliarini
Journal:  Mol Cell       Date:  2017-12-07       Impact factor: 17.970

8.  Human COQ10A and COQ10B are distinct lipid-binding START domain proteins required for coenzyme Q function.

Authors:  Hui S Tsui; Nguyen V B Pham; Brendan R Amer; Michelle C Bradley; Jason E Gosschalk; Marcus Gallagher-Jones; Hope Ibarra; Robert T Clubb; Crysten E Blaby-Haas; Catherine F Clarke
Journal:  J Lipid Res       Date:  2019-05-02       Impact factor: 5.922

9.  Distinctive metabolic profiles between Cystic Fibrosis mutational subclasses and lung function.

Authors:  Afshan Masood; Minnie Jacob; Xinyun Gu; Mai Abdel Jabar; Hicham Benabdelkamel; Imran Nizami; Liang Li; Majed Dasouki; Anas M Abdel Rahman
Journal:  Metabolomics       Date:  2021-01-04       Impact factor: 4.290

Review 10.  Systems Biochemistry Approaches to Defining Mitochondrial Protein Function.

Authors:  Andrew Y Sung; Brendan J Floyd; David J Pagliarini
Journal:  Cell Metab       Date:  2020-04-07       Impact factor: 27.287

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