Literature DB >> 27490630

Genome editing comes of age.

Jin-Soo Kim1,2.   

Abstract

Genome editing harnesses programmable nucleases to cut and paste genetic information in a targeted manner in living cells and organisms. Here, I review the development of programmable nucleases, including zinc finger nucleases (ZFNs), TAL (transcription-activator-like) effector nucleases (TALENs) and CRISPR (cluster of regularly interspaced palindromic repeats)-Cas9 (CRISPR-associated protein 9) RNA-guided endonucleases (RGENs). I specifically highlight the key advances that set the foundation for the rapid and widespread implementation of CRISPR-Cas9 genome editing approaches that has revolutionized the field.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27490630     DOI: 10.1038/nprot.2016.104

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  88 in total

1.  Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.

Authors:  F Ann Ran; Patrick D Hsu; Chie-Yu Lin; Jonathan S Gootenberg; Silvana Konermann; Alexandro E Trevino; David A Scott; Azusa Inoue; Shogo Matoba; Yi Zhang; Feng Zhang
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

2.  Phenotypic alteration and target gene identification using combinatorial libraries of zinc finger proteins in prokaryotic cells.

Authors:  Kyung-Soon Park; Young-Soon Jang; Horim Lee; Jin-Soo Kim
Journal:  J Bacteriol       Date:  2005-08       Impact factor: 3.490

3.  Targeted genome modification of crop plants using a CRISPR-Cas system.

Authors:  Qiwei Shan; Yanpeng Wang; Jun Li; Yi Zhang; Kunling Chen; Zhen Liang; Kang Zhang; Jinxing Liu; Jianzhong Jeff Xi; Jin-Long Qiu; Caixia Gao
Journal:  Nat Biotechnol       Date:  2013-08       Impact factor: 54.908

4.  Highly efficient endogenous human gene correction using designed zinc-finger nucleases.

Authors:  Fyodor D Urnov; Jeffrey C Miller; Ya-Li Lee; Christian M Beausejour; Jeremy M Rock; Sheldon Augustus; Andrew C Jamieson; Matthew H Porteus; Philip D Gregory; Michael C Holmes
Journal:  Nature       Date:  2005-04-03       Impact factor: 49.962

5.  Functional Correction of Large Factor VIII Gene Chromosomal Inversions in Hemophilia A Patient-Derived iPSCs Using CRISPR-Cas9.

Authors:  Chul-Yong Park; Duk Hyoung Kim; Jeong Sang Son; Jin Jea Sung; Jaehun Lee; Sangsu Bae; Jong-Hoon Kim; Dong-Wook Kim; Jin-Soo Kim
Journal:  Cell Stem Cell       Date:  2015-07-23       Impact factor: 24.633

Review 6.  ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.

Authors:  Thomas Gaj; Charles A Gersbach; Carlos F Barbas
Journal:  Trends Biotechnol       Date:  2013-05-09       Impact factor: 19.536

7.  Iterative capped assembly: rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers.

Authors:  Adrian W Briggs; Xavier Rios; Raj Chari; Luhan Yang; Feng Zhang; Prashant Mali; George M Church
Journal:  Nucleic Acids Res       Date:  2012-06-26       Impact factor: 16.971

8.  CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering.

Authors:  Prashant Mali; John Aach; P Benjamin Stranges; Kevin M Esvelt; Mark Moosburner; Sriram Kosuri; Luhan Yang; George M Church
Journal:  Nat Biotechnol       Date:  2013-08-01       Impact factor: 54.908

9.  High-frequency modification of plant genes using engineered zinc-finger nucleases.

Authors:  Jeffrey A Townsend; David A Wright; Ronnie J Winfrey; Fengli Fu; Morgan L Maeder; J Keith Joung; Daniel F Voytas
Journal:  Nature       Date:  2009-04-29       Impact factor: 49.962

10.  Improving CRISPR-Cas nuclease specificity using truncated guide RNAs.

Authors:  Yanfang Fu; Jeffry D Sander; Deepak Reyon; Vincent M Cascio; J Keith Joung
Journal:  Nat Biotechnol       Date:  2014-01-26       Impact factor: 54.908

View more
  24 in total

Review 1.  Aspects of protein-DNA interactions: a review of quantitative thermodynamic theory for modelling synthetic circuits utilising LacI and CI repressors, IPTG and the reporter gene lacZ.

Authors:  Peter D Munro; Gary K Ackers; Keith E Shearwin
Journal:  Biophys Rev       Date:  2016-11-07

2.  Long-Term Effects of In Vivo Genome Editing in the Mouse Retina Using Campylobacter jejuni Cas9 Expressed via Adeno-Associated Virus.

Authors:  Dong Hyun Jo; Taeyoung Koo; Chang Sik Cho; Jin Hyoung Kim; Jin-Soo Kim; Jeong Hun Kim
Journal:  Mol Ther       Date:  2018-10-17       Impact factor: 11.454

3.  Knockout of the Ribonuclease Inhibitor Gene Leaves Human Cells Vulnerable to Secretory Ribonucleases.

Authors:  Sydney P Thomas; Eunji Kim; Jin-Soo Kim; Ronald T Raines
Journal:  Biochemistry       Date:  2016-11-08       Impact factor: 3.162

Review 4.  Epigenome editing: targeted manipulation of epigenetic modifications in plants.

Authors:  Hosub Shin; Woo Lee Choi; Joo Young Lim; Jin Hoe Huh
Journal:  Genes Genomics       Date:  2022-01-09       Impact factor: 1.839

5.  Toward Anticipatory Governance of Human Genome Editing: A Critical Review of Scholarly Governance Discourse.

Authors:  John P Nelson; Cynthia L Selin; Christopher T Scott
Journal:  J Responsible Innov       Date:  2021-07-29

Review 6.  Advances towards Controlling Meiotic Recombination for Plant Breeding.

Authors:  Kyuha Choi
Journal:  Mol Cells       Date:  2017-11-23       Impact factor: 5.034

Review 7.  Recent Advancements in the Regeneration of Auditory Hair Cells and Hearing Restoration.

Authors:  Rahul Mittal; Desiree Nguyen; Amit P Patel; Luca H Debs; Jeenu Mittal; Denise Yan; Adrien A Eshraghi; Thomas R Van De Water; Xue Z Liu
Journal:  Front Mol Neurosci       Date:  2017-07-31       Impact factor: 5.639

8.  Inhibition of long non-coding RNA UCA1 by CRISPR/Cas9 attenuated malignant phenotypes of bladder cancer.

Authors:  Shuai Zhen; Ling Hua; Yun-Hui Liu; Xiao-Min Sun; Meng-Meng Jiang; Wei Chen; Le Zhao; Xu Li
Journal:  Oncotarget       Date:  2017-02-07

9.  Live-cell imaging of circadian clock protein dynamics in CRISPR-generated knock-in cells.

Authors:  Christian H Gabriel; Marta Del Olmo; Amin Zehtabian; Marten Jäger; Silke Reischl; Hannah van Dijk; Carolin Ulbricht; Asylkhan Rakhymzhan; Thomas Korte; Barbara Koller; Astrid Grudziecki; Bert Maier; Andreas Herrmann; Raluca Niesner; Tomasz Zemojtel; Helge Ewers; Adrián E Granada; Hanspeter Herzel; Achim Kramer
Journal:  Nat Commun       Date:  2021-06-18       Impact factor: 14.919

Review 10.  Human Tregs Made Antigen Specific by Gene Modification: The Power to Treat Autoimmunity and Antidrug Antibodies with Precision.

Authors:  Patrick R Adair; Yong Chan Kim; Ai-Hong Zhang; Jeongheon Yoon; David W Scott
Journal:  Front Immunol       Date:  2017-09-21       Impact factor: 7.561

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.