Literature DB >> 27477092

Existing and Developing Approaches for QSAR Analysis of Mixtures.

Eugene N Muratov1,2, Ekaterina V Varlamova3, Anatoly G Artemenko3, Pavel G Polishchuk3, Victor E Kuz'min3.   

Abstract

This review is devoted to the critical analysis of advantages and disadvantages of existing mixture descriptors and their usage in various QSAR/QSPR tasks. We describe good practices for the QSAR modeling of mixtures, data sources for mixtures, a discussion of various mixture descriptors and their application, recommendations about proper external validation specific for mixture QSAR modeling, and future perspectives of this field. The biggest problem in QSAR of mixtures is the lack of reliable data about the mixtures' properties. Various mixture descriptors are used for the modeling of different endpoints. However, these descriptors have certain disadvantages, such as applicability only to 1 : 1 binary mixtures, and additive nature. The field of QSAR of mixtures is still under development, and existing efforts could be considered as a foundation for future approaches and studies. The usage of non-additive mixture descriptors, which are sensitive to interaction effects, in combination with best practices of QSAR model development (e.g., thorough data collection and curation, rigorous external validation, etc.) will significantly improve the quality of QSAR studies of mixtures.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  Mixture descriptors; Predictive modeling; QSAR/QSPR; Synergism

Year:  2012        PMID: 27477092     DOI: 10.1002/minf.201100129

Source DB:  PubMed          Journal:  Mol Inform        ISSN: 1868-1743            Impact factor:   3.353


  18 in total

Review 1.  QSAR without borders.

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2.  QSAR modeling: where have you been? Where are you going to?

Authors:  Artem Cherkasov; Eugene N Muratov; Denis Fourches; Alexandre Varnek; Igor I Baskin; Mark Cronin; John Dearden; Paola Gramatica; Yvonne C Martin; Roberto Todeschini; Viviana Consonni; Victor E Kuz'min; Richard Cramer; Romualdo Benigni; Chihae Yang; James Rathman; Lothar Terfloth; Johann Gasteiger; Ann Richard; Alexander Tropsha
Journal:  J Med Chem       Date:  2014-01-06       Impact factor: 7.446

3.  QSPR modeling of optical rotation of amino acids using specific quantum chemical descriptors.

Authors:  Karina Kapusta; Natalia Sizochenko; Sedat Karabulut; Sergiy Okovytyy; Eugene Voronkov; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2018-02-17       Impact factor: 1.810

4.  Selection of antileishmanial sesquiterpene lactones from SistematX database using a combined ligand-/structure-based virtual screening approach.

Authors:  Chonny Herrera-Acevedo; Mayara Dos Santos Maia; Élida Batista Vieira Sousa Cavalcanti; Ericsson Coy-Barrera; Luciana Scotti; Marcus Tullius Scotti
Journal:  Mol Divers       Date:  2020-09-09       Impact factor: 2.943

5.  Toxicity Assessment of the Binary Mixtures of Aquatic Organisms Based on Different Hypothetical Descriptors.

Authors:  Meng Ji; Lihong Zhang; Xuming Zhuang; Chunyuan Tian; Feng Luan; Maria Natália D S Cordeiro
Journal:  Molecules       Date:  2022-09-27       Impact factor: 4.927

6.  Development of an Infinite Dilution Activity Coefficient Prediction Model for Organic Solutes in Ionic Liquids with Modified Partial Equalization Orbital Electronegativity Method Derived Descriptors.

Authors:  Hyeon-Nae Jeon; Hyun Kil Shin; Sungbo Hwang; Kyoung Tai No
Journal:  ACS Omega       Date:  2021-06-03

7.  In silico evaluation, molecular docking and QSAR analysis of quinazoline-based EGFR-T790M inhibitors.

Authors:  M Asadollahi-Baboli
Journal:  Mol Divers       Date:  2016-05-21       Impact factor: 2.943

Review 8.  Modern approaches to accelerate discovery of new antischistosomal drugs.

Authors:  Bruno Junior Neves; Eugene Muratov; Renato Beilner Machado; Carolina Horta Andrade; Pedro Vitor Lemos Cravo
Journal:  Expert Opin Drug Discov       Date:  2016-05-03       Impact factor: 6.098

9.  Using Delaunay triangulation and Voronoi tessellation to predict the toxicities of binary mixtures containing hormetic compound.

Authors:  Rui Qu; Shu-Shen Liu; Qiao-Feng Zheng; Tong Li
Journal:  Sci Rep       Date:  2017-03-13       Impact factor: 4.379

10.  Discovery of Synergistic and Antagonistic Drug Combinations against SARS-CoV-2 In Vitro.

Authors:  Tesia Bobrowski; Lu Chen; Richard T Eastman; Zina Itkin; Paul Shinn; Catherine Chen; Hui Guo; Wei Zheng; Sam Michael; Anton Simeonov; Matthew D Hall; Alexey V Zakharov; Eugene N Muratov
Journal:  bioRxiv       Date:  2020-06-30
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