| Literature DB >> 27473591 |
Yi Jin1,2, Fang Zhang1, Zhenfa Ma1, Zhuqing Ren3,4.
Abstract
BACKGROUND: Nonsense-mediated mRNA decay (NMD) is a RNA quality surveillance system for eukaryotes. It prevents cells from generating deleterious truncated proteins by degrading abnormal mRNAs that harbor premature termination codon (PTC). However, little is known about the molecular regulation mechanism underlying the inhibition of NMD by microRNAs.Entities:
Keywords: NMD; SMG5; miR-433
Mesh:
Substances:
Year: 2016 PMID: 27473591 PMCID: PMC4966760 DOI: 10.1186/s12867-016-0070-z
Source DB: PubMed Journal: BMC Mol Biol ISSN: 1471-2199 Impact factor: 2.946
Fig. 1MiR-433 targets the 3′-UTR of SMG5. a The predicated seed sequence in 3’-UTR of SMG5 by targetscan (http://www.targetscan.org/). b Luciferase expression level in HEK 293T cells transfected for 24 h with miR-433 mimic or a negative-control microRNA mimic. c Luciferase expression in Hela cells transfected for 48 h with miR-433 inhibitor or a negative-control inhibitor. d Luciferase expression level of the SMG5 WT vs SMG5 mutant in HEK 293T cells transfected for 24 h with a negative-control microRNA mimic (NC). *P < 0.05, and ** means the difference is significant, P < 0.01
Fig. 2Knockdown SMG5 expression repressed NMD activity. a Quantitative polymerase chain reaction (qPCR) analysis of SMG5 mRNA expression in C2C12 cells transfected for 24 h with either three RNA interference fragments or negative control, positive control and Mock respectively. b Western Blot analysis of endogenous SMG5 protein levels in C2C12 cells 24 h after transfection with the RNA interference fragment or a negative control fragment. β-actin was used as the internal control. c–f showed the qPCR and western blot analysis of NMD substrates, TBL2 and GADD45B, mRNA and protein level in C2C12 cells 24 h after transfection with the RNA interference fragment or a negative control fragment. β-actin was used as the internal control. *P < 0.05; **P < 0.01
Fig. 3MiR-433 reduced SMG5 protein and mRNA level. a Western Blot analysis of endogenous SMG5 protein levels in BHK cells 48 h after transfection with mature miR-433 mimic or a random negative-control miRNA mimic (in C2C12 cells 48 h after transfection with miR-433 inhibitor or a random negative-control). β-actin was used as the internal control. b Quantitative polymerase chain reaction (qPCR) analysis of BHK cells transfected for 48 h with the miR-433 mimic or inhibitors (in C2C12 cells). Shown are the results from three independent experiments, normalized to β-actin mRNA levels. **P < 0.01
Fig. 4a, c Western Blot analysis of endogenous NMD substrates, TBL2 and GADD45B protein levels in cells 24 h after transfection with the miR-433 mimic (in BHK cells) or miR-433 inhibitor (in C2C12 cells) or a negative control miRNA mimic. β-actin was used as the internal control. b, d QPCR analysis of two NMD substrates, TBL2 and GADD45B relative mRNA expression level in cells 24 h after transfection with the miR-433 mimic (in BHK cells) or miR-433 inhibitor (in C2C12 cells) or a negative control miRNA mimic. *P < 0.05; **P < 0.01